PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc00269.1.g00440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 345aa MW: 37125.6 Da PI: 9.2805 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 35.4 | 2.4e-11 | 72 | 97 | 2 | 27 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekA 27 pr+rWt+ LH++Fv+ave LGG+e A Zmw_sc00269.1.g00440.1.am.mk 72 PRMRWTTALHAHFVHAVELLGGHETA 97 9**********************998 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.0E-8 | 69 | 97 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 345 aa Download sequence Send to blast |
MSSAAATGVT PDLSLHISPP SPAAGGGATP EGLDAAQRSL RAQQRLHQPN QTAHGFKKSS 60 SSGGGKRSSR APRMRWTTAL HAHFVHAVEL LGGHETALVQ TTYVYGLQCD DQTYPSAAAL 120 LIIRRIQIRS TSIVPLPVPG PISRNCRWNL GKSQSPAEQQ QQQLEHHNAA WIQALLVQHQ 180 LPSTCRTVLP HQYIRLQPDR LFMEQRQRQK GGGAQDHREG AVAHDLAEAG RPAINQKGLS 240 APPTSLVHDA ETVVRGPPSS SNTSSSDDTA SSSDWLQQQT LLMPASTQRY GSNGAISWLT 300 STTPPPPTLE MSLGRQGWQV EQQCGGGGEF EPAPSAKDRT LLKCL |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_025805465.1 | 1e-44 | uncharacterized protein LOC112884302 | ||||
TrEMBL | A0A0A9S0A8 | 5e-54 | A0A0A9S0A8_ARUDO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP27424 | 4 | 5 |