PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00269.1.g00060.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 336aa    MW: 36770.5 Da    PI: 6.4079
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00269.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.51.9e-15144197460
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                                     +k+ rr+ +NRe+ArrsR+RK+  +  Le  v +L+ eN +L k+l  +++++   k
  Zmw_sc00269.1.g00060.1.sm.mkhc 144 VKKMRRMLSNRESARRSRRRKQIHLNDLESQVSSLTDENASLLKRLVDMTQKY---K 197
                                     799************************************99996665555544...3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-14141205IPR004827Basic-leucine zipper domain
PfamPF001701.2E-13143196IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.955143195IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-12144195No hitNo description
Gene3DG3DSA:1.20.5.1708.5E-13145197No hitNo description
PROSITE patternPS000360148163IPR004827Basic-leucine zipper domain
PfamPF124984.1E-16213316IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MPFPVRIPPP RARMFPRGGC EARQESGSFP RTAGFSGDEV AEVGCSYAAA LKRELDLYCA  60
AVAKSMDAKS QESSLGYPNS QASVSSELIS QASFHGDRDG ASLCINSHII DNADSQGMSA  120
NTGILKEQSG DGDDLEEITN PANVKKMRRM LSNRESARRS RRRKQIHLND LESQVSSLTD  180
ENASLLKRLV DMTQKYKDST FDNRNLIVDL EMMRRKVYIA EEAVRVTGAS MLLPPTTSDM  240
PVSSMPLTSS DAASLAVPVQ ENMHPFLQQP LIHGNQFKLD LPNATISLSS REMVTMAVSL  300
RGVASMENLQ KRIHKDSVHS GSALPLSDPE ALNDDK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157164RRSRRRKQ
2159164SRRRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805357.11e-120light-inducible protein CPRF2-like
TrEMBLA0A2T7EIZ51e-120A0A2T7EIZ5_9POAL; Uncharacterized protein
STRINGPavir.Ca02738.1.p1e-113(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943