PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00267.1.g00240.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 421aa    MW: 44552.3 Da    PI: 10.3459
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00267.1.g00240.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.1e-30342400259
                                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                      D ++WrKYGqK++kgs +pr+YY+C++  gCp++k+ver+  dp+++++tYegeH+h+
  Zmw_sc00267.1.g00240.1.sm.mkhc 342 ADDHSWRKYGQKPIKGSSYPRGYYKCSTVrGCPARKHVERDPADPSMLIVTYEGEHRHS 400
                                     599***********************9888****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.8E-19288339IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.0E-31329400IPR003657WRKY domain
PROSITE profilePS5081128.598336402IPR003657WRKY domain
SuperFamilySSF1182904.32E-25339400IPR003657WRKY domain
SMARTSM007741.4E-35341401IPR003657WRKY domain
PfamPF031061.5E-25343399IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MVNFPIPFRP SIASDGSYRV TVCRRYHTKS RSQHVVLAVR CVLRFGCSGH TCASHRLFPV  60
TPSGLAALAP LPYPVFPSAP VTVFPPVRGE RCSGTRRMIT LDLMGGYGRA EEQAAIQEAA  120
AAGLRGVEHL ISQLSRSGTG ESDSSSSPAT RQLNQEEEAE KQKLQQVDGR EVAGMTVSNF  180
KKVVSMLNRT GHARFRRGPV VAQSEGPAAE VAEPAPARSA PALTLDFTAK GAAASGLGNS  240
NAAAGLSLSG ASSSFLSLST ISVTGDGSVS NGCAAARPPV SSSGAARKRR CHDHAHSENG  300
NLAGGRFGST GGRCHCSKRR KHRVKRTIRV PAISEKVADI PADDHSWRKY GQKPIKGSSY  360
PRGYYKCSTV RGCPARKHVE RDPADPSMLI VTYEGEHRHS PGAGAADASP PLAPLPELPN  420
H
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-18329399271WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts, when in complex with WRKY71, specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1. {ECO:0000250|UniProtKB:Q0JEE2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells (By similarity) (PubMed:15618416). Accumulates in response to uniconazole, a gibberellic acid (GA) biosynthesis inhibitor (By similarity). Repressed by GA (PubMed:15618416). {ECO:0000250|UniProtKB:Q0JEE2, ECO:0000269|PubMed:15618416}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004975218.11e-129WRKY transcription factor WRKY51
SwissprotQ6IEN11e-126WRK51_ORYSI; WRKY transcription factor WRKY51
TrEMBLA0A3L6QBB21e-137A0A3L6QBB2_PANMI; Putative WRKY transcription factor 17
STRINGSi012025m1e-128(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171