PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00252.1.g00170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | S1Fa-like | ||||||||
Protein Properties | Length: 75aa MW: 8474.03 Da PI: 11.0824 | ||||||||
Description | S1Fa-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | S1FA | 40.2 | 6.9e-13 | 8 | 41 | 2 | 34 |
S1FA 2 avakvea.kGlnPGlivllvvgglllvflvgnyi 34 +va++++ kGlnPG+i llvv+++ll+f+vg y Zmw_sc00252.1.g00170.1.sm.mk 8 NVAIEDViKGLNPGMIALLVVASFLLLFFVGKYN 41 55666678***********************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04689 | 2.9E-9 | 14 | 41 | IPR006779 | DNA binding protein S1FA |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence Send to blast |
MTKRWGNNVA IEDVIKGLNP GMIALLVVAS FLLLFFVGKY NRRLFLLRKR TGLKEAKEGK 60 TEAGHPPQES KKPHN |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP42961 | 3 | 3 |