PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00211.1.g00450.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 501aa MW: 54396.6 Da PI: 7.012

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00211.1.g00450.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.5	2.2e-31	111	164	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+l+hvkSHLQ+YR+ Zmw_sc00211.1.g00450.1.sm.mk 111 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSLAHVKSHLQMYRS 164 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-28	107	165	IPR009057	Homeodomain-like
PROSITE profile	PS51294	11.896	107	167	IPR017930	Myb domain
SuperFamily	SSF46689	5.73E-14	110	165	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.6E-22	111	166	IPR006447	Myb domain, plants
Pfam	PF00249	1.9E-8	112	163	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence Send to blast
MIARTEQVLE VLDYEEEIRS MDNKALDLNE GVDAVIEEGE LVGDDVDDEE EDDGDDDDGG 60 ITTDAAGSRS SSNNSSTKKD SESKKAGGGK VEGSGEKRVP TVRPYNRSKL PRLRWTPDLH 120 MAFVHAVERL GGQERATPKL VLQMMNVRGL SLAHVKSHLQ MYRSKKLEQD GRPRGAISSV 180 YSPMDFHFMR GDQRFHGMPF LQRAAALSSS VSEPGGFFAS SNGGGLEVSR LHGLLQHRQS 240 QMQRRHEWAL NQREEIITRK DVLKPPSTSG PQPHHPLAPS PAALRSERGW WPFTDAGAGV 300 VAAGGEHTRA DTWNDVNFGG SSGSSSRPIP WGASGDHHLP FRWRPGSGRS NVVDHVSNNI 360 ALIKRPPDPV LIDQAPGDAQ KLKWQKHVEP RPSTSRPAGG ACRKRLPPEA QDLAAPDLQL 420 SLSPTTALDA KKRKNIAAGD GQEIIYSSEL SISLSLSPPA AASIQQQHPP REKTRGSSGG 480 SGEAVLGQST LDLTMSIRAL E

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence Send to blast

MIARTEQVLE VLDYEEEIRS MDNKALDLNE GVDAVIEEGE LVGDDVDDEE EDDGDDDDGG  60
ITTDAAGSRS SSNNSSTKKD SESKKAGGGK VEGSGEKRVP TVRPYNRSKL PRLRWTPDLH  120
MAFVHAVERL GGQERATPKL VLQMMNVRGL SLAHVKSHLQ MYRSKKLEQD GRPRGAISSV  180
YSPMDFHFMR GDQRFHGMPF LQRAAALSSS VSEPGGFFAS SNGGGLEVSR LHGLLQHRQS  240
QMQRRHEWAL NQREEIITRK DVLKPPSTSG PQPHHPLAPS PAALRSERGW WPFTDAGAGV  300
VAAGGEHTRA DTWNDVNFGG SSGSSSRPIP WGASGDHHLP FRWRPGSGRS NVVDHVSNNI  360
ALIKRPPDPV LIDQAPGDAQ KLKWQKHVEP RPSTSRPAGG ACRKRLPPEA QDLAAPDLQL  420
SLSPTTALDA KKRKNIAAGD GQEIIYSSEL SISLSLSPPA AASIQQQHPP REKTRGSSGG  480
SGEAVLGQST LDLTMSIRAL E

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-17	112	166	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-17	112	166	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-17	112	166	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-17	112	166	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025824409.1	1e-175	uncharacterized protein LOC112899951 isoform X1
TrEMBL	A0A2S3GN02	1e-174	A0A2S3GN02_9POAL; Uncharacterized protein
STRING	Si016955m	1e-168	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86