PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00209.1.g00320.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 382aa MW: 40840.6 Da PI: 8.1283

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00209.1.g00320.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.5	1.9e-10	213	265	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 kr++r NR +A rs +RK +++ eLe+k ++L++e ++L +l l+ + Zmw_sc00209.1.g00320.1.sm.mkhc 213 KRAKRILANRQSAARSKERKMKYTSELERKLQTLQTEATTLSAQLTLLQLVYH 265 9*****************************************99998876555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.4E-12	209	273	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.921	211	274	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-9	213	261	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.06E-10	213	269	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.3E-10	213	262	No hit	No description
CDD	cd14703	1.46E-22	214	261	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence Send to blast
MKLPSHPCSF PRAPSAPVHR AHGPPTPSGP GELAALLSQR ELAASRSGCS PDVCRAPARA 60 LTFIRLPDAD LLLDPDGDFF SDLDFPSLSD DSAAASDPAP PPPLQQQQQQ QQQQASSPAP 120 PWPRGGGGGG GAHMRSLSFD AALFDGLSLQ QGGGGGGGGG GSGRAAGHKR SGSVDGPGSP 180 FEGESALSGV LPDYAKKAVP AEKFAEVALL DPKRAKRILA NRQSAARSKE RKMKYTSELE 240 RKLQTLQTEA TTLSAQLTLL QLVYHVVKDE IRDTSGLTTE NRELKLRLQA MEEQAKLRDA 300 LNDALREEVQ RLKIAAGQVP NMNGNPFNGG LPQQQQQMAS YFSQPQQMQY FGGHQIQHHR 360 PNHQPQNSSN GGRSLNDSMD FV

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence Send to blast

MKLPSHPCSF PRAPSAPVHR AHGPPTPSGP GELAALLSQR ELAASRSGCS PDVCRAPARA  60
LTFIRLPDAD LLLDPDGDFF SDLDFPSLSD DSAAASDPAP PPPLQQQQQQ QQQQASSPAP  120
PWPRGGGGGG GAHMRSLSFD AALFDGLSLQ QGGGGGGGGG GSGRAAGHKR SGSVDGPGSP  180
FEGESALSGV LPDYAKKAVP AEKFAEVALL DPKRAKRILA NRQSAARSKE RKMKYTSELE  240
RKLQTLQTEA TTLSAQLTLL QLVYHVVKDE IRDTSGLTTE NRELKLRLQA MEEQAKLRDA  300
LNDALREEVQ RLKIAAGQVP NMNGNPFNGG LPQQQQQMAS YFSQPQQMQY FGGHQIQHHR  360
PNHQPQNSSN GGRSLNDSMD FV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001151391.2	1e-144	transcription factor RF2b
TrEMBL	A0A1D6EHU0	1e-142	A0A1D6EHU0_MAIZE; Transcription factor VIP1
TrEMBL	A0A3L6FZV1	1e-142	A0A3L6FZV1_MAIZE; Transcription factor VIP1
STRING	Pavir.Ha01827.1.p	1e-144	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1925	38	92