PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00209.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 442aa MW: 46546.4 Da PI: 9.0424

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00209.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.2	2.1e-09	117	166	1	50
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 eke kr rr NRe+Ar +R++a +eL++kv+ L+++N+++kk l Zmw_sc00209.1.g00030.1.am.mk 117 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNESMKKVLL 166 89********************************************8664 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.5E-6	114	164	No hit	No description
SMART	SM00338	1.8E-8	117	180	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.9E-8	117	165	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.531	119	163	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.77E-5	121	163	No hit	No description
CDD	cd14702	1.07E-11	122	163	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence Send to blast
MSDDSDEQRQ CRRGVGVHEL DAAMALADLA GVSPEPQKLH PQPATRAAAA EREEDEELAS 60 TGLSLELGKV GIHSSSPCSS TSSAGHHRHH PAQQQQVQAP VSVYGPRPRH NMLTEAEKEA 120 KRLRRVLANR ESARQTILRR QAIRDELARK VADLSSQNES MKKVLLSSHC LSMMVKTNDT 180 CSFEPKVLGF QRGGSPAGSS VAASIRTKNV VDFLIILSLV STASVELRIA RVRSSSGAIS 240 AESLRVARTT KKAPAAARPS QHAVAPSAAS PQTTPPQPSF LSTVAPPTVL VPYVWGSWPP 300 TTGHEHAGSP LAPAPLRLAP CAWYYPAAAV EPTSGGGSPA GAETADEDTD DDPCSLTLAI 360 DLDKRSAPIA IGSSRAAEAG QQVGTERDKA VTTAEARKRR KELTKLKHMH ATAGRPGPVT 420 GGIAGDGGDS TVAFSVVAMA TR

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence Send to blast

MSDDSDEQRQ CRRGVGVHEL DAAMALADLA GVSPEPQKLH PQPATRAAAA EREEDEELAS  60
TGLSLELGKV GIHSSSPCSS TSSAGHHRHH PAQQQQVQAP VSVYGPRPRH NMLTEAEKEA  120
KRLRRVLANR ESARQTILRR QAIRDELARK VADLSSQNES MKKVLLSSHC LSMMVKTNDT  180
CSFEPKVLGF QRGGSPAGSS VAASIRTKNV VDFLIILSLV STASVELRIA RVRSSSGAIS  240
AESLRVARTT KKAPAAARPS QHAVAPSAAS PQTTPPQPSF LSTVAPPTVL VPYVWGSWPP  300
TTGHEHAGSP LAPAPLRLAP CAWYYPAAAV EPTSGGGSPA GAETADEDTD DDPCSLTLAI  360
DLDKRSAPIA IGSSRAAEAG QQVGTERDKA VTTAEARKRR KELTKLKHMH ATAGRPGPVT  420
GGIAGDGGDS TVAFSVVAMA TR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	396	401	RKRRKE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A3L6FZM9	2e-73	A0A3L6FZM9_MAIZE; Uncharacterized protein
STRING	Si026452m	4e-72	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3165	34	75