PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00199.1.g00440.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 868aa MW: 95103.9 Da PI: 11.2914

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00199.1.g00440.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.1	2.1e-05	709	730	5	26
HHHHHHHHHHHHHHHHHHHHCT CS HLH 5 hnerErrRRdriNsafeeLrel 26 h + ErrRR+r+N++fe+Lr+l Zmw_sc00199.1.g00440.1.am.mk 709 HMISERRRRERLNESFETLRRL 730 8889****************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.71E-6	698	730	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	6.1E-5	707	730	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence Send to blast
MGVVRSGWRC PHFIRRKGGS TRREESPWRH KQKRGTRASR GAGGRRDGMA GLHDDAFRYR 60 MPPKGQRRLT EMRSGEVLVL RFQRTCSSFP EPLPTGFEKR SLSPGGCMAF TRGHVESHFD 120 RPPRRNPIRS GASPPPPHAR ACLYLTGFAL STRARRERAS SSISRRSRLL QVRHHQGSPA 180 DRTPGTSASS AARMRERPAP ASAPVATTTG PARRSQLHEL LHSSERRASG DLPFPRPLKP 240 QWHVVHSGPD SFALPHSTTA HSEALSNRTE QQVKQSSAHA GNCSFHEHDR RRSQNPTAMD 300 MDAVQWLVSG QLLILRPFDL DKRERAWPRW KQVLQPETWR PVLYRGHGHA ASNYHEKQHS 360 RAAPLMDAIF ALAPGPRARV LERTAARIPG CLYLFLWAPV IAGPLVRSGH LFCLDTWIGN 420 GGVRVRAVFE AYRGSLCAVV SGCVPGWAFK DGRAYMELSE PDLTASASLQ VQQQCSTLIK 480 FDVVMQMAME IGLSSNDSPG AVADHVQQSL LEELMQMTPP RPPSSSSSSL PSLSIGSPEY 540 SSLIRSMTTT ATEPSSSRER HPLPLHPAAQ LPGFLPPVHG QAPFPSSEAE DAAMAQAILA 600 VIASSAPPAP ATTTPLPLSP PWLVRHRAQR SSPRRWTGAF KAYNAALSPR SRPRPGAPGQ 660 RVVKTAIALM VSVHMAMRER EIAAARQQEG VAAAGQPPPP QPTSSQLHHM ISERRRRERL 720 NESFETLRRL EAQLGLVVPS RTRQTASDDP SDTTTVQVDV TTGASTSTST PTAGQPRTVA 780 IRVTVRAECD LSELVIVLLA RIKETGRFVV VTVDAEQRSS DHAQVSITLR TTVGDDGDLD 840 ETALKEAVAK VVEEAVARPP SPRRHGSP

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence Send to blast

MGVVRSGWRC PHFIRRKGGS TRREESPWRH KQKRGTRASR GAGGRRDGMA GLHDDAFRYR  60
MPPKGQRRLT EMRSGEVLVL RFQRTCSSFP EPLPTGFEKR SLSPGGCMAF TRGHVESHFD  120
RPPRRNPIRS GASPPPPHAR ACLYLTGFAL STRARRERAS SSISRRSRLL QVRHHQGSPA  180
DRTPGTSASS AARMRERPAP ASAPVATTTG PARRSQLHEL LHSSERRASG DLPFPRPLKP  240
QWHVVHSGPD SFALPHSTTA HSEALSNRTE QQVKQSSAHA GNCSFHEHDR RRSQNPTAMD  300
MDAVQWLVSG QLLILRPFDL DKRERAWPRW KQVLQPETWR PVLYRGHGHA ASNYHEKQHS  360
RAAPLMDAIF ALAPGPRARV LERTAARIPG CLYLFLWAPV IAGPLVRSGH LFCLDTWIGN  420
GGVRVRAVFE AYRGSLCAVV SGCVPGWAFK DGRAYMELSE PDLTASASLQ VQQQCSTLIK  480
FDVVMQMAME IGLSSNDSPG AVADHVQQSL LEELMQMTPP RPPSSSSSSL PSLSIGSPEY  540
SSLIRSMTTT ATEPSSSRER HPLPLHPAAQ LPGFLPPVHG QAPFPSSEAE DAAMAQAILA  600
VIASSAPPAP ATTTPLPLSP PWLVRHRAQR SSPRRWTGAF KAYNAALSPR SRPRPGAPGQ  660
RVVKTAIALM VSVHMAMRER EIAAARQQEG VAAAGQPPPP QPTSSQLHHM ISERRRRERL  720
NESFETLRRL EAQLGLVVPS RTRQTASDDP SDTTTVQVDV TTGASTSTST PTAGQPRTVA  780
IRVTVRAECD LSELVIVLLA RIKETGRFVV VTVDAEQRSS DHAQVSITLR TTVGDDGDLD  840
ETALKEAVAK VVEEAVARPP SPRRHGSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	712	717	ERRRRE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022681563.1	0.0	putative transcription factor bHLH041
TrEMBL	A0A3L6PIY5	1e-170	A0A3L6PIY5_PANMI; Uncharacterized protein
STRING	Si007981m	1e-165	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3977	33	67