PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00195.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ZF-HD | ||||||||
Protein Properties | Length: 203aa MW: 21596.2 Da PI: 8.8768 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 98.5 | 4.9e-31 | 134 | 189 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 + v+Y+eC++NhAas+GghavDGC+Efm+ g++gta+al CaAC CHR+FHRreve Zmw_sc00195.1.g00030.1.am.mk 134 KVVHYRECQRNHAASIGGHAVDGCREFMAL-GADGTADALVCAACSCHRSFHRREVE 189 5799*************************9.999********************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 4.0E-19 | 132 | 189 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 1.4E-28 | 136 | 188 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 2.3E-25 | 137 | 188 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 25.696 | 138 | 187 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MERSGAGKRT EKSRTAPTPT KFAVLQPATT LAGKKLLDAF NRTQHLEGAG QASQFIIMQN 60 HTNNWWGTFA SSNGAQPGRA FSSSFLPVSP HQLPFLLVLE APQSPPPTTA TTATMGPKQD 120 PPTANGTATR KETKVVHYRE CQRNHAASIG GHAVDGCREF MALGADGTAD ALVCAACSCH 180 RSFHRREVEV AECSSTTTTT TSG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Si027403m | 2e-42 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1431 | 34 | 120 |