PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00192.1.g00270.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 317aa    MW: 33777.5 Da    PI: 6.6534
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00192.1.g00270.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.2e-3198156259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+
  Zmw_sc00192.1.g00270.1.sm.mk  98 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPSMLIITYTSDHNHP 156
                                   699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.51292158IPR003657WRKY domain
SuperFamilySSF1182902.88E-2695158IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.8E-3195158IPR003657WRKY domain
SMARTSM007743.8E-3797157IPR003657WRKY domain
PfamPF031065.3E-2699156IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MIQHVISGPP PQLLGAAGVA DLRECDVAAP EMDEHGLDMA MDAHPHHAAV IKSSNDTNDA  60
YCTIRKSQAK KVVCIPAPTA APLGVGGRPS TGGEVVPSDL WAWRKYGQKP IKGSPYPRGY  120
YRCSSSKGCS ARKQVERSRT DPSMLIITYT SDHNHPWPTQ RNALAGSTRP AASSSAASKS  180
HPSIGAVVPP PPSLHHHTTG VAGDSGLSNS IGDDVHHQVP KKEVIDVMDH RRAEQDAAAG  240
GDHGLDMLAN MDGAINTVPA SNFNPQNQQQ HAIAGDDDHQ LEQDDKQQLF DPVSFVFLDS  300
WVGASFRIGD ANKGGYT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B5e-2466159280Disease resistance protein RRS1
5w3x_D5e-2466159280Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008658838.12e-98probable WRKY transcription factor 35
TrEMBLA0A1D6KA865e-97A0A1D6KA86_MAIZE; Putative WRKY transcription factor 14
TrEMBLA0A317YCF95e-97A0A317YCF9_MAIZE; Putative WRKY transcription factor 35
STRINGGRMZM2G383594_P018e-98(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118473039