PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00188.1.g00500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | BES1 | ||||||||
Protein Properties | Length: 355aa MW: 37498.4 Da PI: 7.1248 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 196.8 | 7.5e-61 | 11 | 165 | 2 | 148 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr......kgsk 74 g+ r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyr g+k Zmw_sc00188.1.g00500.1.sm.mkhc 11 GGARVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRkvipliPGCK 89 688******************************************************************66666669** PP DUF822 75 pl..eeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvl 143 p+ e+++ +g+sas sp+ss+q +sp +sy++sp+sssfps+ s+++++l + +sl+p+l++l Zmw_sc00188.1.g00500.1.sm.mkhc 90 PPaaERHDPIGQSASPSPCSSYQ--------PSPQASYNPSPASSSFPSSGSSSHLTLGGNnfiggvegSSLIPWLKNL 160 **9999*****************........88999999999999999999888888887788888888*********9 PP DUF822 144 slvss 148 s+++s Zmw_sc00188.1.g00500.1.sm.mkhc 161 SSSPS 165 98554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.6E-66 | 11 | 161 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MTTAGGGGGL GGARVPTWRE RENNRRRERR RRAIAAKIFA GLRAYGNYNL PKHCDNNEVL 60 KALCNEAGWT VEPDGTTYRK VIPLIPGCKP PAAERHDPIG QSASPSPCSS YQPSPQASYN 120 PSPASSSFPS SGSSSHLTLG GNNFIGGVEG SSLIPWLKNL SSSPSFASSS TQIQHLYFNG 180 GSISAPVTPP SSSPTRTPRF KTDWENPSVQ PPWAGENYAS LPNSTPPSPG RQVAPDPAWL 240 AGFQISSAGP SSPTYNLVAP NPFCIFRETV ASSSRMCTPG QSGTCSPVMG DVPAHHDVQM 300 GDGAPDDFAF GSSSNGNNES PGLVKAWEGE RIHEECVSDE LELTLGSSKT RADPS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 8e-22 | 14 | 90 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 8e-22 | 14 | 90 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 8e-22 | 14 | 90 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 8e-22 | 14 | 90 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025813584.1 | 0.0 | protein BZR1 homolog 3 | ||||
Swissprot | Q5Z9E5 | 0.0 | BZR3_ORYSJ; Protein BZR1 homolog 3 | ||||
TrEMBL | A0A1E5VA88 | 0.0 | A0A1E5VA88_9POAL; Protein BZR1-like protein 3 | ||||
STRING | Pavir.J12085.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Publications ? help Back to Top | |||
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