PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00188.1.g00320.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 515aa MW: 55979.8 Da PI: 7.0435

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00188.1.g00320.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.9	1.7e-31	116	169	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ Zmw_sc00188.1.g00320.1.am.mk 116 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 169 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.9E-29	112	170	IPR009057	Homeodomain-like
PROSITE profile	PS51294	12.601	112	172	IPR017930	Myb domain
SuperFamily	SSF46689	5.02E-14	115	170	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.4E-22	116	171	IPR006447	Myb domain, plants
Pfam	PF00249	8.9E-9	117	168	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence Send to blast
MGDVKEKVVV EILEDDEKRS SGNSLPPVVL DLNEGFAEGS EEGEVGDDGD ENDDEDRADD 60 DGGSTSEVAG RGRSSSNNSS TNHNSGSNKD HDSSSKAEGS GERVPTVRQY NRSKLPRLRW 120 TPDLHMAFVH AVERLGGQER ATPKLVLQMM NVRGLSIAHV KSHLQMYRSK KLDHESGHER 180 AAGISSVFSP MDFRMRRGDP RFRDMFLQRE PGSALSSSLL QNSGFFGSRN GVSPDASRIY 240 GLFQHRQPTM RTFDFKNYSS LRNQELMFNH HAATTRVGAI TDHGPAKGLI HNMIFRKDGK 300 PTSHLFDVRD AIASNPSAVT GAANRSSNWD GSSPRPLSRT ISASSSTGFA LENHHFLSRR 360 RCAGGSNGYH FDTNTTSSDP VVTSEALGTR LEKNLEPKSP NKVIDEMHTA TGTKRPKTSM 420 EVNGWAPDLQ LSLSPNEGAE AEKAKKRKVA LSEQEVDTDK MPPLSFSLSL RGGDSGGEGS 480 GGDARRLEAE IGSSSKAAAR GLSTLDLTMS IKALE

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence Send to blast

MGDVKEKVVV EILEDDEKRS SGNSLPPVVL DLNEGFAEGS EEGEVGDDGD ENDDEDRADD  60
DGGSTSEVAG RGRSSSNNSS TNHNSGSNKD HDSSSKAEGS GERVPTVRQY NRSKLPRLRW  120
TPDLHMAFVH AVERLGGQER ATPKLVLQMM NVRGLSIAHV KSHLQMYRSK KLDHESGHER  180
AAGISSVFSP MDFRMRRGDP RFRDMFLQRE PGSALSSSLL QNSGFFGSRN GVSPDASRIY  240
GLFQHRQPTM RTFDFKNYSS LRNQELMFNH HAATTRVGAI TDHGPAKGLI HNMIFRKDGK  300
PTSHLFDVRD AIASNPSAVT GAANRSSNWD GSSPRPLSRT ISASSSTGFA LENHHFLSRR  360
RCAGGSNGYH FDTNTTSSDP VVTSEALGTR LEKNLEPKSP NKVIDEMHTA TGTKRPKTSM  420
EVNGWAPDLQ LSLSPNEGAE AEKAKKRKVA LSEQEVDTDK MPPLSFSLSL RGGDSGGEGS  480
GGDARRLEAE IGSSSKAAAR GLSTLDLTMS IKALE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	4e-18	117	171	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	4e-18	117	171	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	4e-18	117	171	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	4e-18	117	171	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025812252.1	0.0	uncharacterized protein LOC112889712
TrEMBL	A0A2T7DXS0	0.0	A0A2T7DXS0_9POAL; Uncharacterized protein
STRING	Pavir.Db01175.1.p	0.0	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86