PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00175.1.g00260.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 477aa MW: 48996.7 Da PI: 4.56

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00175.1.g00260.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.4	1.3e-37	31	87	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + l+cprCdst+tkfCyynny+l qPr+fCk+CrryWt+GGalrnvPvGgg+rk + Zmw_sc00175.1.g00260.1.am.mk 31 AGLPCPRCDSTDTKFCYYNNYNLGQPRHFCKGCRRYWTRGGALRNVPVGGGTRKATA 87 6789*************************************************9865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	8.9E-32	33	86	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.956	33	87	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	35	71	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	6.0E-24	35	83	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence Send to blast
MAGHQAAEGN ALALVAAAAA AAGGGGPKEP AGLPCPRCDS TDTKFCYYNN YNLGQPRHFC 60 KGCRRYWTRG GALRNVPVGG GTRKATAAXX XXSSASTASA TALLVSSSPV PLSVSAPAYA 120 TTVLPYDLPS FMPALGTSPL AAVEPDRRLL DLGGSFTSLL APAPDVRFSA GFLVGGLPPV 180 MPPPASSAPA LLLPPPHPPV SQALAPEGFI WSMGCNGSGD PVLLYRRSSA SLELGLLLFL 240 GDAVVMEPQP GSSASPGTPS PSFSPKATTP VAEMPASPPS GPLTEDEPAA PLQSAEAKPD 300 DWATWSEELP RNDADKNPLL YDGGSAVTQA PAVQTMPALD DAAAVPGGSG FDPNRIPASV 360 FQPRTSVSQA DWSMTSNESL FSLHGSRQSV DGLYAGSRSH FDYFYDEAMA EQDSKLPPLE 420 EGAEAGDSVD AREFTVKGSG GLHASAGSVE AKKAAVFPRN ESGSSGGSEN FSFAFPM

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence Send to blast

MAGHQAAEGN ALALVAAAAA AAGGGGPKEP AGLPCPRCDS TDTKFCYYNN YNLGQPRHFC  60
KGCRRYWTRG GALRNVPVGG GTRKATAAXX XXSSASTASA TALLVSSSPV PLSVSAPAYA  120
TTVLPYDLPS FMPALGTSPL AAVEPDRRLL DLGGSFTSLL APAPDVRFSA GFLVGGLPPV  180
MPPPASSAPA LLLPPPHPPV SQALAPEGFI WSMGCNGSGD PVLLYRRSSA SLELGLLLFL  240
GDAVVMEPQP GSSASPGTPS PSFSPKATTP VAEMPASPPS GPLTEDEPAA PLQSAEAKPD  300
DWATWSEELP RNDADKNPLL YDGGSAVTQA PAVQTMPALD DAAAVPGGSG FDPNRIPASV  360
FQPRTSVSQA DWSMTSNESL FSLHGSRQSV DGLYAGSRSH FDYFYDEAMA EQDSKLPPLE  420
EGAEAGDSVD AREFTVKGSG GLHASAGSVE AKKAAVFPRN ESGSSGGSEN FSFAFPM