PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00174.1.g00310.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 346aa MW: 37146.1 Da PI: 8.0485

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00174.1.g00310.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.5	1.6e-09	184	242	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +++ eLe+k ++L++e ++L ++ l+ + l++e+ Zmw_sc00174.1.g00310.1.sm.mkhc 184 KRAKRILANRQSAARSKERKIKYTSELERKLQTLQTEATTLSAQVTLLQRDTSGLTTEN 242 9********************************************99999888887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-14	180	244	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.875	182	245	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.46E-10	184	235	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.5E-10	184	238	No hit	No description
Pfam	PF00170	3.8E-8	184	242	IPR004827	Basic-leucine zipper domain
CDD	cd14703	9.32E-24	185	234	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MDPRFPPPAP ASSSFLGDGA PPPRGHHRRA HSETFIRLPD ADLLLDPDGD FFSDLDFPSL 60 SDDSAAASDP APPPPLQQQQ QQQQQASSPA PPRPRGGGGG GGAHMRSLSF DAALFDGLSL 120 QQGGGGGGGG GGSGRAAGHK RSGSVDGPGS PFEGESALSG VLPDYAKKAV PAEKFAEVAL 180 LDPKRAKRIL ANRQSAARSK ERKIKYTSEL ERKLQTLQTE ATTLSAQVTL LQRDTSGLTT 240 ENRELKLRLQ AMEEQAKLRD ALNDALREEV QRLKIAAGQV PNMNGNPFNG GLPQQQQQQQ 300 QMASYFSQPQ QMQYFGGHQV QHHRPHHQPQ NSSNGGRSLN DSMDFM

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MDPRFPPPAP ASSSFLGDGA PPPRGHHRRA HSETFIRLPD ADLLLDPDGD FFSDLDFPSL  60
SDDSAAASDP APPPPLQQQQ QQQQQASSPA PPRPRGGGGG GGAHMRSLSF DAALFDGLSL  120
QQGGGGGGGG GGSGRAAGHK RSGSVDGPGS PFEGESALSG VLPDYAKKAV PAEKFAEVAL  180
LDPKRAKRIL ANRQSAARSK ERKIKYTSEL ERKLQTLQTE ATTLSAQVTL LQRDTSGLTT  240
ENRELKLRLQ AMEEQAKLRD ALNDALREEV QRLKIAAGQV PNMNGNPFNG GLPQQQQQQQ  300
QMASYFSQPQ QMQYFGGHQV QHHRPHHQPQ NSSNGGRSLN DSMDFM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001141497.1	1e-166	uncharacterized LOC100273609
TrEMBL	A0A3L6F450	1e-164	A0A3L6F450_MAIZE; Transcription factor VIP1
TrEMBL	B4FWJ9	1e-164	B4FWJ9_MAIZE; BZIP transcription factor
STRING	GRMZM2G079365_P01	1e-165	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1925	38	92