PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00159.1.g00180.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 311aa    MW: 33964.1 Da    PI: 11.183
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00159.1.g00180.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-11221281262
                                   XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                                   ke  r +r+ +NR++A+  R+RKka++ eLe k+k Le  N +L +++++l++e  +l++ 
  Zmw_sc00159.1.g00180.1.am.mk 221 KEQNRLKRLLRNRVSAQQARERKKAYLTELEAKAKGLELRNAELEQRVSTLQNENNTLRQI 281
                                   78899***************************************************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-12220284IPR004827Basic-leucine zipper domain
PfamPF001705.9E-10221282IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.967222285IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.06E-11225282No hitNo description
CDDcd147041.32E-20225275No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-15225284No hitNo description
PROSITE patternPS000360227242IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MRWRRVWCRG TPRSPRCGRR MAMPCTAGMA PHPKNPTDLH FSVFRRTQTL SLSCFSPSAL  60
SHPICNLHPP SLPFAVRCPF SRAACFKIWG EREEEMAAQE QEQEEKQQAK TSATSSHPTS  120
SERSSSSAPS NLREGGMSRQ PPQSLAPLGG ERRGDSAGAG DRERRVGLVG RGRGXXXXGA  180
GADERGAKDD GEPAQQHPAA ETQGPQPPAA GKKRGRAPGD KEQNRLKRLL RNRVSAQQAR  240
ERKKAYLTEL EAKAKGLELR NAELEQRVST LQNENNTLRQ ILKNTTAHAG KRAGGGAKGG  300
DGGKKHHFTK S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210216GKKRGRA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008655674.13e-56transcription factor HY5
TrEMBLA0A3L6SSD37e-56A0A3L6SSD3_PANMI; Transcription factor HY5-like
STRINGPavir.Eb00436.1.p6e-58(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111