PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00157.1.g00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | HB-other | ||||||||
Protein Properties | Length: 384aa MW: 40994.9 Da PI: 9.2218 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 15.2 | 3.6e-05 | 286 | 315 | 18 | 47 |
HHHHSSS--HHHHHHHHHHCTS-HHHHHHH CS Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvW 47 F+ + +p++e+ LA+k+g++ +qVk W Zmw_sc00157.1.g00040.1.am.mk 286 SFKWCAHPDEEAQMALAMKIGMEPTQVKHW 315 688999************************ PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.7E-4 | 285 | 315 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence Send to blast |
MEEAGGDDMI NPDPQRLLTN GTKGSTTAPR CSNEADGRPA IGLPAPAWLP CDPRPIDRNG 60 DVFVGHMARV DVQMACAQGS MSIVFLREDN HVLCALSTVV SDRLPSHDRH SAHARIHLEK 120 KALLVVTLIS RKGKGPPLSS PQELYATRTL PPQRSPGLPL VAGRRIHHYP PPCTSSLPPL 180 GAPSLAPALH PQPPPTPRWP LPPSPSHPLV ATALPSPAAP LVGPTLHPLA GPPSPSPASR 240 PHPTSPGRSP RPSLSSSPSR PLTGPRPPST SCPPHHRPRP PPHRHSFKWC AHPDEEAQMA 300 LAMKIGMEPT QVKHWSMMTQ PVTPSSTSTH RSRLQSPELD TVAQTDAGLP KVNMTTGDDA 360 MVGLDDPTVM TFKPLNACSQ LQSS |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP65935 | 2 | 2 |