PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00105.1.g00420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 321aa MW: 35933.7 Da PI: 6.4096 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.8 | 9.1e-49 | 13 | 139 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 pGfrFhPt+eel+++yL+ v+gkkl++ ++i +++iy+++PwdLp+++k +e+ewyfF++rd+k+ +g r+nr+t++g Zmw_sc00105.1.g00420.1.sm.mkhc 13 PGFRFHPTEEELLDFYLHSVVHGKKLNF-DIIGTLNIYRHDPWDLPRMAKIGEREWYFFVPRDRKAGSGGRPNRTTEHG 90 9*************************99.99***************988999*************************** PP NAM 82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wkatg+d+++ s+ ++++glkktLvfykgrap+g+ktdWvm eyrl Zmw_sc00105.1.g00420.1.sm.mkhc 91 FWKATGSDRAIRSSadAKRVIGLKKTLVFYKGRAPRGTKTDWVMSEYRL 139 ************99777888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.12E-55 | 4 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.679 | 11 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-24 | 13 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MATASMEMEQ DLPGFRFHPT EEELLDFYLH SVVHGKKLNF DIIGTLNIYR HDPWDLPRMA 60 KIGEREWYFF VPRDRKAGSG GRPNRTTEHG FWKATGSDRA IRSSADAKRV IGLKKTLVFY 120 KGRAPRGTKT DWVMSEYRLP EFGFAVRGAA PAPPKEDIVL CKVYRKATPL KELEQRATEM 180 EERQRCSNLD YMTRASLVGV SPSAGDDYLS PDDVHDSFLV LSSSSSEPSE DSNNATMAAK 240 KEADATVTLA ASSLPPLQQI AATPAAVNMP SMQLPTVTHG DLPSLQVPAN NGVFDWMQDP 300 FQLRSTWQDQ FFLSPLANLL Y |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-47 | 7 | 166 | 10 | 168 | Stress-induced transcription factor NAC1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025795753.1 | 1e-163 | NAC domain-containing protein 22 | ||||
Swissprot | Q10S65 | 1e-138 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A3L6S6V0 | 1e-164 | A0A3L6S6V0_PANMI; NAC domain-containing protein 67-like | ||||
STRING | Pavir.J24394.1.p | 1e-159 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Publications ? help Back to Top | |||
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