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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zmw_sc00093.1.g00290.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family | WRKY | ||||||||
| Protein Properties | Length: 316aa MW: 35128.7 Da PI: 8.0997 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 59.3 | 7.2e-19 | 138 | 198 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS.STTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae.dpkvveitYegeHnh 58
+D ++WrKYG K++ +sefpr YY+C+++ +Cp+kk v+++++ dp + +t +H++
Zmw_sc00093.1.g00290.1.sm.mk 138 NDRFHWRKYGEKKILDSEFPRLYYKCSYSddhKCPAKKYVQQQNNgDPPQFLVTLVYKHTC 198
7***************************99999*******987643888888888888887 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:2.20.25.80 | 6.6E-20 | 128 | 199 | IPR003657 | WRKY domain |
| SuperFamily | SSF118290 | 3.4E-19 | 133 | 199 | IPR003657 | WRKY domain |
| SMART | SM00774 | 4.7E-27 | 137 | 200 | IPR003657 | WRKY domain |
| Pfam | PF03106 | 6.0E-20 | 138 | 198 | IPR003657 | WRKY domain |
| PROSITE profile | PS50811 | 14.573 | 138 | 196 | IPR003657 | WRKY domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 316 aa Download sequence Send to blast |
MSTRPKSARV SPQPPSPPAP SNQRDAAIQE LRRGSQLAAM LRQQLELIPE VDRREAAAAS 60 VSEIAEAMDS SLFILQSESE HSSSQAGAMA MPSPADLSSD VSTGTRRAAV PRARKVRHRR 120 GRLGELPVKE ILTDGPQNDR FHWRKYGEKK ILDSEFPRLY YKCSYSDDHK CPAKKYVQQQ 180 NNGDPPQFLV TLVYKHTCGT LFRDEASSSS GSLQVLDFRN ASVGPPLATA TLGLKKEEDT 240 DISMYMHSYE YELSQMMPPN GDQANFSPGP RWSVFIVVAY LLMHFIGPEE ESSRKSISDK 300 VHLPAMPGIS HLQLSN |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_022681297.1 | 6e-96 | probable WRKY transcription factor 63 | ||||
| TrEMBL | K3Z8R3 | 1e-94 | K3Z8R3_SETIT; Uncharacterized protein | ||||
| STRING | Si022933m | 2e-95 | (Setaria italica) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP9993 | 29 | 44 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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