PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00092.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 443aa MW: 47050.6 Da PI: 7.4363

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00092.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	83.9	1.6e-26	258	317	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++ gs++prsYYrCt++ gC++kkkv+r ++dp + e+tY g+H++ Zmw_sc00092.1.g00010.1.sm.mk 258 DDGYTWRKYGQKDILGSRYPRSYYRCTHKtyyGCEAKKKVQRLDDDPFTYEVTYCGNHTC 317 8*************************9999************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.9E-26	253	317	IPR003657	WRKY domain
SuperFamily	SSF118290	4.71E-24	255	317	IPR003657	WRKY domain
SMART	SM00774	1.2E-36	257	319	IPR003657	WRKY domain
PROSITE profile	PS50811	22.068	258	315	IPR003657	WRKY domain
Pfam	PF03106	1.4E-24	258	317	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence Send to blast
MACNTDPLVI KSGTVQIASS PASPSEASQT PLFMQVLAGH PHPQHPFTLD HLRGSVNINQ 60 KITGDELLGQ LGAMDDVLSQ IHQAFQLASQ LMQELSGGQN DPAYLAERCH GIARAYAAAI 120 RMLQPHGRTE VGATQLLPPS ASDLLRQWRP DHREAGGTVA NNPFLGSPPS AQLGHLLEPS 180 SFHTLAEAFS ATRAHEMVRT GADVAGTSGG PVRRVAPSSR GSPPIQPRQG RRRRESGDRR 240 TVMVPAHRAG GDTDQPPDDG YTWRKYGQKD ILGSRYPRSY YRCTHKTYYG CEAKKKVQRL 300 DDDPFTYEVT YCGNHTCLTS TTPLLTLPAT ATTDTVTTNS PTSSGAILAQ DLAVVTAERH 360 PAPALSTAIQ LGMSSMPSSL VGASSSAGGG GEGNGAPANV PISGTGREME YPVMDLADAM 420 FNSGSSGGSS MDAIFSSPRP RDR

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence Send to blast

MACNTDPLVI KSGTVQIASS PASPSEASQT PLFMQVLAGH PHPQHPFTLD HLRGSVNINQ  60
KITGDELLGQ LGAMDDVLSQ IHQAFQLASQ LMQELSGGQN DPAYLAERCH GIARAYAAAI  120
RMLQPHGRTE VGATQLLPPS ASDLLRQWRP DHREAGGTVA NNPFLGSPPS AQLGHLLEPS  180
SFHTLAEAFS ATRAHEMVRT GADVAGTSGG PVRRVAPSSR GSPPIQPRQG RRRRESGDRR  240
TVMVPAHRAG GDTDQPPDDG YTWRKYGQKD ILGSRYPRSY YRCTHKTYYG CEAKKKVQRL  300
DDDPFTYEVT YCGNHTCLTS TTPLLTLPAT ATTDTVTTNS PTSSGAILAQ DLAVVTAERH  360
PAPALSTAIQ LGMSSMPSSL VGASSSAGGG GEGNGAPANV PISGTGREME YPVMDLADAM  420
FNSGSSGGSS MDAIFSSPRP RDR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6ir8_A	2e-21	258	317	9	68	OsWRKY45
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022681211.1	1e-119	probable WRKY transcription factor 53
TrEMBL	A0A3B6PH69	1e-117	A0A3B6PH69_WHEAT; Uncharacterized protein
STRING	BRADI2G30800.1	1e-117	(Brachypodium distachyon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9796	33	44