PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00073.1.g00330.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 353aa MW: 39170.6 Da PI: 9.9543

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00073.1.g00330.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.5	5.1e-07	223	259	17	53
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 A+rsR RK+++i+eLe+kv++L++e + e+e l+ Zmw_sc00073.1.g00330.1.sm.mkhc 223 AQRSRVRKLQYIAELERKVQALQSEGIEVSAEMEFLT 259 899*********************9777666666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.5E-6	212	271	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.21E-15	213	263	No hit	No description
SuperFamily	SSF57959	2.88E-6	222	265	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.0E-9	223	265	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MMANGKLQKQ ALLPPRSPFP TAAAAPYADR SWIARTQGAP HHRHGHSHHQ RTSSESFIEE 60 QPSWLEDLLN EPETPVRQHG RAGHRRSSSD SFALFDGGAA GAGACASGFE AVSRGGGKVA 120 ARGGVQEYYA KPGLFGRPQG RSWEQGMPNL GGYRHGNGPP MPMKEKPGGH HGPPSAFRNH 180 DYGMDNRAPD DAGHDQKVGL KEGVPPKHAQ LEADTKRAKQ QYAQRSRVRK LQYIAELERK 240 VQALQSEGIE VSAEMEFLTQ QNIMLDLENK ALKQRLESLT QEQRIKRFQQ EMFEREIGHL 300 RSLYQQQQQQ LSQAPALGRS NSSDLDSQFA NLSLKYNKDP NSGRDSLSGS LRT

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MMANGKLQKQ ALLPPRSPFP TAAAAPYADR SWIARTQGAP HHRHGHSHHQ RTSSESFIEE  60
QPSWLEDLLN EPETPVRQHG RAGHRRSSSD SFALFDGGAA GAGACASGFE AVSRGGGKVA  120
ARGGVQEYYA KPGLFGRPQG RSWEQGMPNL GGYRHGNGPP MPMKEKPGGH HGPPSAFRNH  180
DYGMDNRAPD DAGHDQKVGL KEGVPPKHAQ LEADTKRAKQ QYAQRSRVRK LQYIAELERK  240
VQALQSEGIE VSAEMEFLTQ QNIMLDLENK ALKQRLESLT QEQRIKRFQQ EMFEREIGHL  300
RSLYQQQQQQ LSQAPALGRS NSSDLDSQFA NLSLKYNKDP NSGRDSLSGS LRT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025828158.1	0.0	uncharacterized protein At4g06598-like
Refseq	XP_025828159.1	0.0	uncharacterized protein At4g06598-like
TrEMBL	A0A0A9E2N8	0.0	A0A0A9E2N8_ARUDO; Uncharacterized protein
STRING	Pavir.Hb01242.1.p	1e-175	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3310	36	66