PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00069.1.g00200.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 323aa MW: 36774.6 Da PI: 4.25

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00069.1.g00200.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	37.2	8.5e-12	149	236	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83 +++ws++D + +L l d++ k+++ p + +++a+ + k+ ++++ ++l Ki++LK +k++vkk +++ Zmw_sc00069.1.g00200.1.am.mk 149 RKVWSNNDAVRILELLGDYRRKHDTLPENkHLEAVLRGQLKR--VQYTLKDLNAKIKSLKSLYKRNVKK-----ARLPTNA 222 689***************9999877664666666555444..5778899***************.....667799 PP DUF573 84 hdqkifelskkiWg 97 hd+ +f lsk++Wg Zmw_sc00069.1.g00200.1.am.mk 223 HDRRVFLLSKQVWG 236 *************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	4.3E-14	149	236	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence Send to blast
MAPKRRAQPP PPPPPSVVEP SEMTGTSSGS DELEEVIAPS PRARSPKKNK AAPPLQHPEA 60 WDKEEADGEE EEEQQEETDG EEEDDGNDEE ADGEEKEEEA EADGDEEEEE EEEEEEEEKE 120 EEETVGKEED EEGDEEEEVR IVPAASFYRK VWSNNDAVRI LELLGDYRRK HDTLPENKHL 180 EAVLRGQLKR VQYTLKDLNA KIKSLKSLYK RNVKKARLPT NAHDRRVFLL SKQVWGPVAN 240 PADATVPADF EEMCAVFPYL GDVLKELKTE NPGVFNKEFS LIPKEKARAL DKKFKEEVEE 300 EIKVQENAYK VKNKVLKAIM GLI

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP35732	3	4