PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00063.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 166aa MW: 18541.9 Da PI: 10.1033

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00063.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	69.3	5.9e-22	107	163	1	57
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN++L++e+++++ke++ Zmw_sc00063.1.g00030.1.am.mkhc 107 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRAEVLKQENTSLRDEVNRIRKEIK 163 89*****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.9E-20	101	165	No hit	No description
Pfam	PF00170	1.3E-19	107	163	IPR004827	Basic-leucine zipper domain
SMART	SM00338	1.9E-13	107	165	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	13.128	109	166	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.19E-11	110	165	No hit	No description
CDD	cd14702	5.84E-19	112	161	No hit	No description
PROSITE pattern	PS00036	0	114	129	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence Send to blast
MGSSRHPCHQ VHKPMIPPYG TPPPPYVMYP PGVYAHPSMP PGAHPFTPYA ITSPNGNADV 60 SDSQKGSGQE QDGDVRSFQN GVSRSPSEGK LNQTMAIMPM PSSGPDEREL KRQRRKQSNR 120 ESARRSRLRK QAECEELAQR AEVLKQENTS LRDEVNRIRK EIKVLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	129	RRSRLRK
2	123	130	RRSRLRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269\|Ref.1}.
UniProt	Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269\|Ref.2}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269\|Ref.1}.
UniProt	INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269\|Ref.2}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004960729.1	1e-47	bZIP transcription factor 68
Refseq	XP_012700421.1	1e-47	bZIP transcription factor 68
Swissprot	A0A3B6MPP5	3e-41	BZP1D_WHEAT; bZIP transcription factor 1-D
Swissprot	B6E107	3e-41	BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBL	K3Z705	2e-46	K3Z705_SETIT; Uncharacterized protein
STRING	Si022325m	4e-47	(Setaria italica)

Publications ? help Back to Top
Appels R, et al. Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science, 2018. [PMID:30115783]