PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00049.1.g00270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 27723.8 Da PI: 9.1038 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.2 | 1.5e-11 | 122 | 163 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ gt +eAa+++++a+ Zmw_sc00049.1.g00270.1.sm.mkhc 122 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRAAF 163 79**98..47*********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 8.966 | 97 | 176 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.2E-6 | 121 | 164 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.2E-4 | 121 | 178 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-8 | 121 | 166 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.9E-6 | 124 | 168 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MLSINFFLMY MLFPYNPDSI AGGISSMVSL RRRRLLGLCS GKYSLPVDLP KPIDDVEPVH 60 SNAKPFSVHP LPLTEICNVL VDSPSGMDSF KEEIKQYYPG KEIKRRKRHR RKQYVDQEPC 120 IMRGVYFKNM KWQAAIKVDK KQIHLGTVGT QDEAARLYDR AAFMCGREPN FELSEEVKQE 180 LQKYTWEEFL AKTRNAITSK KQRKAGLLRC SKAELVMGQS DGDTEMINGG GSSNSDSGDA 240 ENSAA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001151501.1 | 1e-121 | uncharacterized protein LOC100285135 | ||||
TrEMBL | C0P9B0 | 1e-119 | C0P9B0_MAIZE; Ethylene-responsive transcription factor-like protein | ||||
STRING | Pavir.Aa01947.1.p | 1e-116 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7516 | 35 | 45 |