PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00024.1.g00610.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 350aa MW: 38796.9 Da PI: 9.2369

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00024.1.g00610.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.6	9.5e-07	220	259	17	56
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 A+rsR RK+++i+eLe+kv++L++e + e+e l+++ Zmw_sc00024.1.g00610.1.am.mkhc 220 AQRSRVRKLQYIAELERKVQALQSEGIEVSAEMEFLTQQN 259 89***********************988888888887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.5E-6	209	268	IPR004827	Basic-leucine zipper domain
CDD	cd14703	3.80E-16	210	260	No hit	No description
SuperFamily	SSF57959	2.94E-6	219	262	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.4E-7	220	262	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence Send to blast
MVRSQLDPDL SSCWHGPFPT AAAAPYADRI ARTQGAPHHR HGHSHHQRTS SESFIEEQPS 60 WLEDLLNEPE TPVRQHGRAG HRRSSSDSFA LFDGGAAGAG ACASGFEAVS RGGGKVAARG 120 GVQEYYAKPG LFGRPQGRSW EQGTPNLGGY RHGNGPPMPM KEKPGGHHGP PSAFRNHDHG 180 MDNRAPDDAG HDQKVGLKEG VPPKYAQLEA DTKRAKQQYA QRSRVRKLQY IAELERKVQA 240 LQSEGIEVSA EMEFLTQQNI MLDLENKALK QRLESLTQEQ RIKRFQQEIF EREIGRLRSL 300 YQQQQQQLSQ APALGHSNSS DLDSQFANLS LKYNKDPNSG RDSLSGSLRT

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence Send to blast

MVRSQLDPDL SSCWHGPFPT AAAAPYADRI ARTQGAPHHR HGHSHHQRTS SESFIEEQPS  60
WLEDLLNEPE TPVRQHGRAG HRRSSSDSFA LFDGGAAGAG ACASGFEAVS RGGGKVAARG  120
GVQEYYAKPG LFGRPQGRSW EQGTPNLGGY RHGNGPPMPM KEKPGGHHGP PSAFRNHDHG  180
MDNRAPDDAG HDQKVGLKEG VPPKYAQLEA DTKRAKQQYA QRSRVRKLQY IAELERKVQA  240
LQSEGIEVSA EMEFLTQQNI MLDLENKALK QRLESLTQEQ RIKRFQQEIF EREIGRLRSL  300
YQQQQQQLSQ APALGHSNSS DLDSQFANLS LKYNKDPNSG RDSLSGSLRT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025828158.1	1e-166	uncharacterized protein At4g06598-like
Refseq	XP_025828159.1	1e-166	uncharacterized protein At4g06598-like
TrEMBL	A0A0A9E2N8	1e-174	A0A0A9E2N8_ARUDO; Uncharacterized protein
STRING	Pavir.Hb01242.1.p	1e-160	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3310	36	66