PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00017.1.g00410.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 362aa    MW: 39271.4 Da    PI: 9.6531
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00017.1.g00410.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.5e-11201230534
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                                     k  rr+++NReAAr+sR+RKka+i++Le+ 
  Zmw_sc00017.1.g00410.1.sm.mkhc 201 KTLRRLAQNREAARKSRLRKKAYIQQLETS 230
                                     788************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-6197259IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-8198240No hitNo description
PROSITE profilePS502178.841199243IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.0E-7201236No hitNo description
PfamPF001703.5E-8201230IPR004827Basic-leucine zipper domain
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
PfamPF141442.4E-24285358IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MAHILNQIAT SRDLCEEREA VEEDGLGLHK GSMGGSGGGE EHHHRRQPSD LPVGFQSAAS  60
PRPMIASSTM SKESVSSYDM AEFDQSAIFL YLDGHDQASI QEQRQTLNIF PSQPMHAAEP  120
IPAKVGNMGM VTAMLANANH SSPKRPEQGG QRSLVPSPPG PSVAAPKENK SSGVTIAKKE  180
VTSGRKGAAG SSDQGRVRDP KTLRRLAQNR EAARKSRLRK KAYIQQLETS RIRLSQLEQQ  240
VQTARVQGVF SGTGGQLGFP SASSPAAAMF DLEYGRWVEE HSKLMFQLRA ALNEPQLLED  300
QLQGFVNAAV AQHEKLLNLK GAIARADVFH LLSGVWASPA ERGFLWLGGF RPSEVIKVFC  360
SS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025804474.11e-149transcription factor TGAL7-like isoform X3
SwissprotQ6H4341e-126TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBLA0A3L6TBM41e-156A0A3L6TBM4_PANMI; Transcription factor TGA2-like isoform X1
STRINGSi029966m1e-146(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]