PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00006.1.g00690.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 267aa MW: 28432.8 Da PI: 9.203

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00006.1.g00690.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.9	3.8e-17	194	245	3	54
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +++r +r++kNRe+A rsR+RK+a++ eLe++vk L++eN++L+ + e+l+ Zmw_sc00006.1.g00690.1.am.mk 194 SDRRKKRMIKNRESAARSRARKQAYVRELEKEVKLLQQENQSLRVKYEQLRV 245 689******************************************9999975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.9E-13	192	261	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.99	194	244	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.6E-15	195	246	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.0E-15	196	247	No hit	No description
CDD	cd14707	7.02E-22	196	243	No hit	No description
SuperFamily	SSF57959	1.94E-12	196	245	No hit	No description
PROSITE pattern	PS00036	0	199	214	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence Send to blast
MDLGQENEAL ANRSRNLSIQ SGGPGQPASR APLWPCGVPL RAQNKQGERS PTDRAPFGVM 60 AAMDMDDDED IWANSPSPSA SPPRSAACGF ISTQLSLNSH LHLLSSSAAD AGGVHGGSPT 120 DHSVGDGIFA ADGGFRHQAG VSGGFRNAAA SSFFPYGVDA VPAPYDSDAA RSALEHEMCL 180 GPAAAAWAGS VAGSDRRKKR MIKNRESAAR SRARKQAYVR ELEKEVKLLQ QENQSLRVKY 240 EQLRVSVEVP VPTPVKKTLR RMPSAPF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004957504.1	1e-80	ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	K3ZWU5	2e-79	K3ZWU5_SETIT; Uncharacterized protein
STRING	Si031077m	4e-80	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9764	30	44