PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma96g00050.1
Common NameZOSMA_96G00050
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 313aa    MW: 35341 Da    PI: 4.806
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma96g00050.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.4e-11141184447
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                      +k+  r +kNR +A +sR+RK+++++ Le k+k Le+e ++L  
  Zosma96g00050.1 141 SKKRLRQIKNRDSAMKSRERKRKYVKDLEAKAKILESECRRLEH 184
                      68999*********************************987654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-4137202IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.197140203IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-9142195No hitNo description
PfamPF001701.5E-7142184IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.4E-10142201No hitNo description
CDDcd147041.06E-12143193No hitNo description
PROSITE patternPS000360146160IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MELAITEYDF ESFFESISVD FDFDADFPLP EIAEDIAFPS NMDQPSAMTN DPTNSSPLWV  60
KDLENFLMTG DEDGEGETEV IHPDLLPYAS SEDLSEKRSE GEVTGKGMDL EVRSEEGTEG  120
GDLSGIKGDV DEERSGDEDI SKKRLRQIKN RDSAMKSRER KRKYVKDLEA KAKILESECR  180
RLEHLYQCVK AENISLHRHL QKDSVSVVYQ AGQESAVLFK ESLLLGSLFW LVSIAYLFLG  240
SNLLTWNLLD GAGKKGRSDP RKKQDQETVL TRGIRSEILL TPPVLNSKSV FMRRRYKALK  300
PKFKKIILIS CS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141162KKRLRQIKNRDSAMKSRERKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NJS30.0A0A0K9NJS3_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69343750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.17e-11basic region/leucine zipper motif 60