PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma92g00460.1 | ||||||||
Common Name | ZOSMA_92G00460 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | Nin-like | ||||||||
Protein Properties | Length: 254aa MW: 29258.5 Da PI: 5.0604 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 89.3 | 3e-28 | 116 | 165 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++++ed+s+yF++pi++AAk+L+v+lT+LK++CR++GI+RWPhRk+ksl Zosma92g00460.1 116 SNLTFEDVSRYFYMPITQAAKQLNVGLTLLKKRCRELGIPRWPHRKMKSL 165 69**********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 18.553 | 98 | 187 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 3.2E-23 | 117 | 165 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051302 | Biological Process | regulation of cell division |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MEENNPVIGD YIFDSIFAGV IGLQSSTAPI WDWQNDYYTG EPQIVLPFAT TQLGTFSPDC 60 SFLPYRYRDL FLLPDDILPS MFDTDHTEVI AKVEDISPIK RTVERTMTEN QEKSLSNLTF 120 EDVSRYFYMP ITQAAKQLNV GLTLLKKRCR ELGIPRWPHR KMKSLQTLID NVQELGMENG 180 IAGECQLRCA LQILKEEKKM IEKKPEIQLE EKTKRLRQAY FKANYKKRRL LCIDSAPATT 240 DDDDNNSFIN IIT* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020255496.1 | 5e-58 | protein RKD1-like isoform X2 | ||||
TrEMBL | A0A0K9NL52 | 0.0 | A0A0K9NL52_ZOSMR; Protein RKD2 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4590 | 33 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 1e-37 | RWP-RK domain-containing protein |
Link Out ? help Back to Top | |
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Phytozome | Zosma92g00460.1 |