PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma91g00400.1
Common NameZOSMA_91G00400
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family NAC
Protein Properties Length: 279aa    MW: 31381.2 Da    PI: 7.5446
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma91g00400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.26.7e-49141411128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtdeelv +yL++k++++++++  +i+ev++yk++Pw+Lp+++  + k wyf ++rd+ky++g+r+nrat +gyWkatg dk+v+ 
  Zosma91g00400.1  14 LPPGFRFHPTDEELVLNYLCPKTTNSPTPV-PIIAEVHLYKYDPWQLPEMALFGGKAWYFLTPRDRKYPNGSRPNRATVNGYWKATGADKPVTP 106
                      79*************************999.88***************7667799**************************************9 PP

              NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +++ vg+kk Lvfy+g+ap g+kt+W+mheyrl
  Zosma91g00400.1 107 EgRSTPVGIKKALVFYTGKAPVGVKTNWIMHEYRL 141
                      867778***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-605173IPR003441NAC domain
PROSITE profilePS5100556.8314173IPR003441NAC domain
PfamPF023656.0E-2615141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MVKRTRDAVA DLNLPPGFRF HPTDEELVLN YLCPKTTNSP TPVPIIAEVH LYKYDPWQLP  60
EMALFGGKAW YFLTPRDRKY PNGSRPNRAT VNGYWKATGA DKPVTPEGRS TPVGIKKALV  120
FYTGKAPVGV KTNWIMHEYR LVGTGNNSNR CKSNGKNGSL RLDDWVLCRL YNKKKNWENE  180
LRQQQPSMNQ RRQSDNESFG ESFEAVEETL SEIEIETQSQ LHLDGKIKED YDWFMNDINF  240
DYINHSSETA ASAAAAATAY NGSAVSSLGI LSDFAFGN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-8521793174Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020254522.18e-98LOW QUALITY PROTEIN: NAC domain-containing protein 68-like
SwissprotQ52QH44e-89NAC68_ORYSJ; NAC domain-containing protein 68
TrEMBLA0A0K9NJ340.0A0A0K9NJ34_ZOSMR; NAC domain-containing protein 67
STRINGXP_010257746.12e-94(Nelumbo nucifera)
STRINGGSMUA_Achr6P32330_0011e-94(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38033775
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-80NAC domain containing protein 32
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Taga Y, et al.
    Role of OsHSP90 and IREN, Ca2+ dependent nuclease, in plant hypersensitive cell death induced by transcription factor OsNAC4.
    Plant Signal Behav, 2009. 4(8): p. 740-2
    [PMID:19820348]
  3. Xia N, et al.
    Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses.
    Mol. Biol. Rep., 2010. 37(8): p. 3703-12
    [PMID:20213512]
  4. Takasaki H, et al.
    The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice.
    Mol. Genet. Genomics, 2010. 284(3): p. 173-83
    [PMID:20632034]
  5. Nakayama A, et al.
    Genome-wide identification of WRKY45-regulated genes that mediate benzothiadiazole-induced defense responses in rice.
    BMC Plant Biol., 2013. 13: p. 150
    [PMID:24093634]
  6. Ootsubo Y,Hibino T,Wakazono T,Mukai Y,Che FS
    IREN, a novel EF-hand motif-containing nuclease, functions in the degradation of nuclear DNA during the hypersensitive response cell death in rice.
    Biosci. Biotechnol. Biochem., 2016. 80(4): p. 748-60
    [PMID:26766411]