PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma91g00400.1 | ||||||||
Common Name | ZOSMA_91G00400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | NAC | ||||||||
Protein Properties | Length: 279aa MW: 31381.2 Da PI: 7.5446 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.2 | 6.7e-49 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeelv +yL++k++++++++ +i+ev++yk++Pw+Lp+++ + k wyf ++rd+ky++g+r+nrat +gyWkatg dk+v+ Zosma91g00400.1 14 LPPGFRFHPTDEELVLNYLCPKTTNSPTPV-PIIAEVHLYKYDPWQLPEMALFGGKAWYFLTPRDRKYPNGSRPNRATVNGYWKATGADKPVTP 106 79*************************999.88***************7667799**************************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ vg+kk Lvfy+g+ap g+kt+W+mheyrl Zosma91g00400.1 107 EgRSTPVGIKKALVFYTGKAPVGVKTNWIMHEYRL 141 867778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.22E-60 | 5 | 173 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.83 | 14 | 173 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.0E-26 | 15 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence Send to blast |
MVKRTRDAVA DLNLPPGFRF HPTDEELVLN YLCPKTTNSP TPVPIIAEVH LYKYDPWQLP 60 EMALFGGKAW YFLTPRDRKY PNGSRPNRAT VNGYWKATGA DKPVTPEGRS TPVGIKKALV 120 FYTGKAPVGV KTNWIMHEYR LVGTGNNSNR CKSNGKNGSL RLDDWVLCRL YNKKKNWENE 180 LRQQQPSMNQ RRQSDNESFG ESFEAVEETL SEIEIETQSQ LHLDGKIKED YDWFMNDINF 240 DYINHSSETA ASAAAAATAY NGSAVSSLGI LSDFAFGN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-85 | 2 | 179 | 3 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt stress (PubMed:18813954, PubMed:20632034). Induced by dehydration, cold stress and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020254522.1 | 8e-98 | LOW QUALITY PROTEIN: NAC domain-containing protein 68-like | ||||
Swissprot | Q52QH4 | 4e-89 | NAC68_ORYSJ; NAC domain-containing protein 68 | ||||
TrEMBL | A0A0K9NJ34 | 0.0 | A0A0K9NJ34_ZOSMR; NAC domain-containing protein 67 | ||||
STRING | XP_010257746.1 | 2e-94 | (Nelumbo nucifera) | ||||
STRING | GSMUA_Achr6P32330_001 | 1e-94 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3803 | 37 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 3e-80 | NAC domain containing protein 32 |
Link Out ? help Back to Top | |
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Phytozome | Zosma91g00400.1 |