PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zosma8g00670.1 | ||||||||
Common Name | ZOSMA_8G00670 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 295aa MW: 33573.2 Da PI: 7.406 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 41.7 | 3.1e-13 | 44 | 144 | 4 | 96 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgk.....spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk..aksgkepsfskehdqkife 90 +++w+ee iv+L Gl++fka+++ + + di + + kksi ++ + l++K+r+L+ Kf ++ +k+ k+ + ++ ++ Zosma8g00670.1 44 RKMWTEEESIVILNGLVEFKATHNEsrapcNLAEyDILRDHLLSKKSITGDFDRIKLSDKVRKLRSKFLSLYNNknIKNRKNGVNLCGYERVLYD 138 689****************99888756555334457777788899***********************9766554478888888888999999** PP DUF573 91 lskkiW 96 l +kiW Zosma8g00670.1 139 LGRKIW 144 *****9 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.1E-12 | 45 | 144 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 295 aa Download sequence Send to blast |
MAESENPTLA VLFVKPLRSK PMKNNNKNHN IALSPPPTSS SSYRKMWTEE ESIVILNGLV 60 EFKATHNESR APCNLAEYDI LRDHLLSKKS ITGDFDRIKL SDKVRKLRSK FLSLYNNKNI 120 KNRKNGVNLC GYERVLYDLG RKIWVNGNTK SVDGEEVVRE IDSDGLKNST KHVNYLDGDD 180 DDVYTDDDDC IGGKKEKKIV DVDDGDDSAQ GVLPPCAVLK NVVKNLEKND ELIMQGTLKL 240 ALQMMKPERQ KAWDEKWTNQ CLVETQAFKK RKVLEKNLVE ELEEIFIKTN QNLT* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9NLF7 | 0.0 | A0A0K9NLF7_ZOSMR; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61730.1 | 1e-08 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
---|---|
Phytozome | Zosma8g00670.1 |