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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma86g00170.1 |
| Common Name | ZOSMA_86G00170 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
GRAS |
| Protein Properties |
Length: 478aa MW: 53098.8 Da PI: 5.0944 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma86g00170.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 281.6 | 2.4e-86 | 45 | 465 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalkl..fsevsPi 90
++lL++cA+a++++d++laq++L+ l+++a dgd++qRla f++ L r +r + +l a++ ++ +e + s++++a++l f +++P+
Zosma86g00170.1 45 EQLLVHCANAIETNDATLAQQILWILNNIAPADGDSNQRLANAFLRSLLCRASRsDSCKLLTAVAYRAIEEISmvKSHRFSAVELasFIDLTPW 138
79****************************************************444455666655555544444666667777799******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg.....skeeleetgerLakfAeelgvpfef 178
++f++ +aN aI+eaveg + +Hi+D+ ++++Q p+L++aLa+Rpegpp lR+T+ +++ ++ e+g+rL +fA++ ++ +ef
Zosma86g00170.1 139 HRFGYTAANAAIVEAVEGFSVIHIVDLTTTHCMQIPTLIEALANRPEGPPiILRLTVPLLTSTNpppplLDISYDELGSRLINFARSRNILMEF 232
**********************************************999989****976655556788888999******************** PP
GRAS 179 nvl.......vakrledleleeLrvkpgEalaVnlvlqlhrll.................................desvsleserdevLklvk 232
+++ + +e ++l++L + Eal+Vn+++ lh+++ + s++ s r+ +Lk ++
Zosma86g00170.1 233 KAVpsdpsdaFDSLIEYVRLHQLISDAPEALVVNCQMLLHTIPeetagaihqmisvsstttttttttattittapiQTSTPFISLRTMFLKSLR 326
***888666444456667999999999*************************************************999999999********* PP
GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkp 326
sl+P +v++++++ad+ s+++ r+ + ++y + +d+++a lp+ se+r+++E + ++++n++a e +r+er+e +kW +r+ eaGF+
Zosma86g00170.1 327 SLEPVIVTLIDEDADLVSNDLIGRLRSGFNYLWIPYDAVDAFLPQGSEKRQWYESD-VFWKVENLIARERLQRVERQEIRSKWVQRMAEAGFRR 419
********************************************************.779********************************** PP
GRAS 327 vplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+++e+a +++++ll +++ g+ +++e++ lvl+Wk++++v++++W
Zosma86g00170.1 420 NSFGEEAITEVRALLDEHA-AGWGLKKEEEDLVLTWKGHNVVFATSW 465
*******************.899************************ PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 478 aa
Download sequence Send
to blast |
MMQFTKTTGR LELPTVVSFS SGSCFSVPEN LPYGGGSSKS GEHMEQLLVH CANAIETNDA 60
TLAQQILWIL NNIAPADGDS NQRLANAFLR SLLCRASRSD SCKLLTAVAY RAIEEISMVK 120
SHRFSAVELA SFIDLTPWHR FGYTAANAAI VEAVEGFSVI HIVDLTTTHC MQIPTLIEAL 180
ANRPEGPPII LRLTVPLLTS TNPPPPLLDI SYDELGSRLI NFARSRNILM EFKAVPSDPS 240
DAFDSLIEYV RLHQLISDAP EALVVNCQML LHTIPEETAG AIHQMISVSS TTTTTTTTTA 300
TTITTAPIQT STPFISLRTM FLKSLRSLEP VIVTLIDEDA DLVSNDLIGR LRSGFNYLWI 360
PYDAVDAFLP QGSEKRQWYE SDVFWKVENL IARERLQRVE RQEIRSKWVQ RMAEAGFRRN 420
SFGEEAITEV RALLDEHAAG WGLKKEEEDL VLTWKGHNVV FATSWLPQLI LPATIMP*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
