PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma84g00360.1 | ||||||||
Common Name | ZOSMA_84G00360 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | WRKY | ||||||||
Protein Properties | Length: 449aa MW: 48868.6 Da PI: 7.1615 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.6 | 3.4e-30 | 225 | 284 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ Zosma84g00360.1 225 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAqGCPVRKQVQRCFEDMSILITTYEGTHNHP 284 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.6E-32 | 210 | 286 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.09E-27 | 219 | 286 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 28.943 | 220 | 286 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.2E-37 | 225 | 285 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.5E-27 | 226 | 284 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence Send to blast |
MVDLPVVAGG RMGMPEIDLS LNLDHGHGVT KMGDDAAVSE GACRKDEKKP QLQHESTMIS 60 DELSVLLMEL NEMKEENKHL RRSVEKTTEE YHQLQMRYDA IQHQFRNCSL ALGSCGGGLI 120 DKNLTEYSTV SGNVTDGGGH GQIPNWLGNY QSDNRLGLSL KLQTRSDKAS SELELERNFK 180 PVGNNNHICE PEIAAELAGI ATQSINPTNR KTRVSVRARC QGPTMNDGCQ WRKYGQKIAK 240 GNPCPRAYYR CTVAQGCPVR KQVQRCFEDM SILITTYEGT HNHPLPVGAT AMASTTTASS 300 QYTLLSDGTA CSQSTSLPLD ETAAYIGSFV AAPQKPIQYH NTNLNLYNLQ GQAQGRTNPI 360 HSSDVVTYDQ MNHFAALPSS YARILDRTAG TSNAHSWMEP STRSTQSLSD NVNAIASDPT 420 FKVAVAAAVS SLISKDRQNR TVNGSSGN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-21 | 212 | 288 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9NLY8 | 0.0 | A0A0K9NLY8_ZOSMR; Putative WRKY transcription factor |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8022 | 34 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 2e-51 | WRKY DNA-binding protein 9 |
Link Out ? help Back to Top | |
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Phytozome | Zosma84g00360.1 |