PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma7g01510.1
Common NameZOSMA_7G01510
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family CAMTA
Protein Properties Length: 922aa    MW: 104264 Da    PI: 6.2233
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma7g01510.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1153.54.7e-4881213116
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     +e + rwlk++ei  iL n++k++++++ +++p+sgsl+L+nr++++yfrkDGy+w+kkkdg++  E he+LKv++v++++cyYah+een++f++
  Zosma7g01510.1   8 NEaHIRWLKPREIFFILRNHDKYTVSETVPKTPPSGSLLLFNRRVLKYFRKDGYTWQKKKDGRS-GEGHERLKVDSVDTINCYYAHGEENANFHK 101
                     56588**********************************************************7.8***************************** PP

            CG-1  97 rcywlLeeelekivlvhyle 116
                     r+yw+L++++e+ivlvhy+e
  Zosma7g01510.1 102 RIYWMLDQAYEHIVLVHYRE 121
                     ******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143762.1363128IPR005559CG-1 DNA-binding domain
SMARTSM010762.4E-606123IPR005559CG-1 DNA-binding domain
PfamPF038594.6E-439121IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.106.6E-7334439IPR013783Immunoglobulin-like fold
CDDcd001022.79E-4354439No hitNo description
SuperFamilySSF812961.96E-16355438IPR014756Immunoglobulin E-set
PfamPF018332.2E-7355437IPR002909IPT domain
Gene3DG3DSA:1.25.40.201.9E-14545642IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.52E-15546641IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029713.867547639IPR020683Ankyrin repeat-containing domain
CDDcd002042.90E-12552639No hitNo description
PfamPF127961.6E-7564641IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.927580612IPR002110Ankyrin repeat
SMARTSM002481.5E-4580609IPR002110Ankyrin repeat
SMARTSM0001529698720IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.943699727IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525406.64E-8701800IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000156.7751773IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.632752781IPR000048IQ motif, EF-hand binding site
PfamPF006120.082755772IPR000048IQ motif, EF-hand binding site
SMARTSM000157.8E-5774796IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.542775799IPR000048IQ motif, EF-hand binding site
PfamPF006122.3E-5776795IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 922 aa     Download sequence    Send to blast
MDIDKLKNEA HIRWLKPREI FFILRNHDKY TVSETVPKTP PSGSLLLFNR RVLKYFRKDG  60
YTWQKKKDGR SGEGHERLKV DSVDTINCYY AHGEENANFH KRIYWMLDQA YEHIVLVHYR  120
EIFEVRSGSS QTPLNSSVSL SYSISLNNTQ NTGLTAGISE VCMPRDLIKV GSGNVEVSSK  180
LLVENHSSDW SANSTNSSQR NLDAEIRKLK SQLSLDDDDE VDQSYSQGAQ CATPDHYHQF  240
DDDIQYGKSM TAGDPKYAQK NNYNHTSGDE FTVNTHNHGN DTLSFPSEIE FQGLTKQLEM  300
LNNQPEIIQS YQYPLESFEQ QFSEAGNLPF YSNVESKTGE FFSGQNMVDK YQFSIHEVSP  360
EWAYSSESTK VIVTGDFPSL SLEGPWAVMF GNTLVPAEII QEGVLRCQSP NHAAGKVRLY  420
ITMRNGQPCS QIKQFEYRDK VGSDFGTNSP ERCLGFNSKE LVHLLRFSRC LLFTSDDNVE  480
SESDPSRILT LRNEEWDQII ETSLFGNENP KDTLNWLLEQ LLKDRLHLLL SSRYQKDEST  540
CCSLSKKERG MIHLISGLGY EWGLKPLLHC GVGINFRDIN GWTALHWAAL FGREKMVAAL  600
LASGASPGAV TDPTSQDPLG KTAAMIAESN GYRGLAGYLS EISLTSHLSS IDKEECEAYL  660
ESADPRIGSL LDRKRQINLS SSEEERLSLE DTLAAARNAT QAAARIQAVF RAHSFQKKQQ  720
KNSNNASCDN YSLIPEDIVG ISAASRFHDQ KSHGAALCIQ KKMRGWKGRK GFLILRKNAV  780
KIQAHVRGHQ VRKKYIDILW TVGVAEKAIL RWRRKGCGLR GFHHESDAMD DTEQDDDEDD  840
DILKAFRKIK VDETIKSAVS RVMSMLDFPE AQTQYRRVFD NYLQFKSGPV VSDEATAPEC  900
STLLSSQSSF MSMFEDWLNM E*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NQ990.0A0A0K9NQ99_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62383241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-124Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains