PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma7g01370.1
Common NameZOSMA_7G01370
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family CO-like
Protein Properties Length: 429aa    MW: 47703.2 Da    PI: 5.2604
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma7g01370.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box19.12.7e-061548235
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHk 35
                    +++ C+ ++e+ + ++C+ +   lC  C    H+
  Zosma7g01370.1 15 SKPPCDFCGEETAVIYCRADTARLCLFCDHDVHS 48
                    5789*************************99995 PP
2CCT65.71.3e-22376419144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     R +a++RY+eKrk+R+++K+irYesRKa+A++R+RvKGrFvk++
  Zosma7g01370.1 376 RGNAMMRYREKRKNRRYDKHIRYESRKARADTRKRVKGRFVKST 419
                     7789**************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003365.0E-121461IPR000315B-box-type zinc finger
PROSITE profilePS501199.21461IPR000315B-box-type zinc finger
CDDcd000214.91E-61749No hitNo description
PROSITE profilePS501199.0357105IPR000315B-box-type zinc finger
CDDcd000210.001756185No hitNo description
SMARTSM003362.462105IPR000315B-box-type zinc finger
PROSITE profilePS5101715.348376418IPR010402CCT domain
PfamPF062031.1E-16376418IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MMTERASSTS EIANSKPPCD FCGEETAVIY CRADTARLCL FCDHDVHSAN ALSKKHGRGQ  60
ICDKCTSEVA SVLCCADGVV LCHNCNSQAS TTAFSGSVSH SRSPIELFYG CPDAAKIASL  120
WGIDLDEAYS GGNDLMMKDL YVPCAVNGRG MKLVLLQQLM ELARREGEKG YGCDVGAEEV  180
EAEDCGGDQG LRDCASVDLE AKSSKTGNNM IDEQGYLDSI PFTSLLTMPS YAKCGEERDQ  240
IVEEDSGFFW DCAPASQPSQ IWDFHSGKSR DHNEDKLLLP LEASYIATES GFMDKRYRNL  300
LKKKTSATKI TLEDNYERNC VPTNEDVSST VNPIMLTNHY TNQEPDSSGN NAEARIANEE  360
THTAEIRNND QMAQNRGNAM MRYREKRKNR RYDKHIRYES RKARADTRKR VKGRFVKSTE  420
GLVFYNND*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NMZ50.0A0A0K9NMZ5_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP45042026
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33500.22e-68B-box type zinc finger protein with CCT domain