PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma78g00920.1
Common NameZOSMA_78G00920
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family GeBP
Protein Properties Length: 345aa    MW: 38861 Da    PI: 9.3367
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma78g00920.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57355.71.4e-17120213197
           DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 
                      k+fqrlw++e e++l +Gl++++a++gk p++  d + + + +k+ ++ ++  sq+ +K + L kK  ++  k      ++ ske+d+k++++ 
  Zosma78g00920.1 120 KMFQRLWTDEEELLLAKGLVKYHANHGKTPVSagDFSVLADEMKGVLQKDFLISQYKTKTKALYKKLSNHLVK-----GFNSSKENDKKCMDIL 208
                      58**************************887778************************************999.....78899*********** PP

           DUF573  93 kkiWg 97 
                      kkiWg
  Zosma78g00920.1 209 KKIWG 213
                      ****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.7E-14122213IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MKKKSHTPQP PPLPPSFSSS TEDDSTDDDT SSQQHSPNTI ISKTLPSNAK AKSSLPPSES  60
KSEETENESS ENSSSEHIVA ATPPPSKKRK STSGKAKEPE PELKSELKPE PSSNIAGSRK  120
MFQRLWTDEE ELLLAKGLVK YHANHGKTPV SAGDFSVLAD EMKGVLQKDF LISQYKTKTK  180
ALYKKLSNHL VKGFNSSKEN DKKCMDILKK IWGDELKADP TSSKKQVKEI ANGHVQDVTM  240
LDPSSPQKKK VKTKAVDQAQ VAENEEEETD ADIDMLEEIF DKHYMEVSFK RNLKKRLLCL  300
DPKEKQHWIV MFKDSMKSRA KLEFDFMQSI LNKDDKEIEK KKKR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
115KKKSH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NNH80.0A0A0K9NNH8_ZOSMR; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.11e-09DNA-binding storekeeper protein-related transcriptional regulator