PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma62g00170.1
Common NameZOSMA_62G00170
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 420aa    MW: 46904.5 Da    PI: 6.7071
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma62g00170.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.5e-10134166537
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvke 37 
                      k  rr+++NReAAr+sR+RKka++++Le    +
  Zosma62g00170.1 134 KTMRRLAQNREAARKSRLRKKAYVQQLESSRIK 166
                      7789***********************975444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-6130193IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.5E-7132177No hitNo description
PROSITE profilePS502179.255132176IPR004827Basic-leucine zipper domain
PfamPF001701.1E-6134169IPR004827Basic-leucine zipper domain
CDDcd147087.12E-22134184No hitNo description
SuperFamilySSF579591.94E-6134177No hitNo description
PROSITE patternPS000360137152IPR004827Basic-leucine zipper domain
PfamPF141442.3E-30216292IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MHSTRTSIGF HIHDSDDSTN LTRNPIFEFK SSAQLEEETP SHPLQFHNDI PYTCIAPSET  60
RQTRQPVSNL ISSSTSRGHC ENWGESLMAD TSPKTTDTST DVDNDDKNQR MEAGHVSMFT  120
VSNSSERGKP GDQKTMRRLA QNREAARKSR LRKKAYVQQL ESSRIKLNQI EKELQRARQQ  180
GLFIPASGDQ SHSMGVNGAL AFDAEYAQWL DEQNKQVNEL RTAVNSHASD NELGDMVDGV  240
MAHWDDVFKL KTIAAKADVF HILSGMWKTP AERCFLWLGG FRSSELLKLL ASQLEPLTEK  300
QLLDICNLQQ SSQQAEDALS QGMEALQQSL AETLASGTLG PSSSPGNVTN YMGQMAMSIG  360
KLGAIENFIR QADNLRQQTL QQMHRILTIR QSARALLAIH DYFSRLRALS SLWLARPQD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008788487.10.0transcription factor TGA2.3-like isoform X2
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A0K9NT750.0A0A0K9NT75_ZOSMR; Transcription factor HBP-1b(C1)
STRINGXP_008788486.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-148bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]