PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma48g00410.1
Common NameZOSMA_48G00410
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 401aa    MW: 43766.2 Da    PI: 6.0184
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma48g00410.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.36.2e-17195249357
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                      ++kr +r+++NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+l  ++++ +
  Zosma48g00410.1 195 DVKRIKRMISNRESARRSRRRKQAHLGELETQVSQLRVENSSLLKRLTDINQKFS 249
                      78******************************************99988887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-18193257IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.254195250IPR004827Basic-leucine zipper domain
PfamPF001701.2E-14196248IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.84E-12196247No hitNo description
Gene3DG3DSA:1.20.5.1705.2E-13197248No hitNo description
CDDcd147022.26E-6198249No hitNo description
PROSITE patternPS000360200215IPR004827Basic-leucine zipper domain
PfamPF124984.9E-20264373IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MERVYSLDGM SESFWAAAPV PEFEDRREKI GRSPSEWEFA KFFQETSDSC SIPQPTTTPE  60
IVSRSSSNPI PPSGKSISDP EFLKRQLDLA CAAAANFNRT SGVNARESSP TDTSRSQDSD  120
NSQMGSSQTL KGSVYPLPKA QDMDINGSTG KPVSLNVQNT SSQIRPATSG SSRDPSDDDD  180
LEGEPEITEN MDPADVKRIK RMISNRESAR RSRRRKQAHL GELETQVSQL RVENSSLLKR  240
LTDINQKFSE ASVNSRILKA DVETMRAKVK MAEDTVKRVT GLNPMFPIPN MSNPSTNNLP  300
LSVATTNHAS STDHIQDDLN HYIQSLLDIS LDSSQITETQ NGTGVVPKIG GIGTTAMPTV  360
ANMEHLQKHI NGGSGSHSGN AQWNGASHWD QDNSGCRNHH *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1209216RRSRRRKQ
2211216SRRRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936048.13e-78light-inducible protein CPRF2 isoform X2
TrEMBLA0A0K9NZ990.0A0A0K9NZ99_ZOSMR; Light-inducible protein CPRF2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.24e-45bZIP family protein