PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zosma351g00200.1

Common Name

ZOSMA_351G00200

Organism

Zostera marina

Taxonomic ID

29655

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera

Family

FAR1

Protein Properties

Length: 112aa MW: 12910.7 Da PI: 10.3827

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zosma351g00200.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.9	5.9e-07	13	54	50	90
FAR1 50 kerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 k r++ + r +Cka+++ + ++ + +w+v+ ++++H+Hel Zosma351g00200.1 13 KITRKSHNIRESCKAQITFEIDTgSTNWRVHIFVEHHTHELI 54 556788899************9**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 112 aa Download sequence Send to blast
MKKMETDLIE CHKITRKSHN IRESCKAQIT FEIDTGSTNW RVHIFVEHHT HELITLRKRR 60 FLRVNRHMSS TPRGLLDSLN SAHIQSFQQY SYAAMASGTF SNPSFIMTST S*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0K9P6U0	2e-77	A0A0K9P6U0_ZOSMR; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1424	4	94

Link Out ? help Back to Top
Phytozome	Zosma351g00200.1