PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma34g01230.1
Common NameZOSMA_34G01230
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family TCP
Protein Properties Length: 297aa    MW: 31144.5 Da    PI: 8.7544
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma34g01230.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP132.63.7e-41551882121
              TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.....k 89 
                      ++kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++  ++s+++ +sns+s+     +
  Zosma34g01230.1  55 TVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStVSVSNRNGGSNSNSNsngttQ 148
                      689*************************************************************999998875333444444433333322231 PP

              TCP  90 aaksaakskksqksaasalnlakesr...............akarar 121
                      ++    +s+ s+ ++ +++n +   +               +++r++
  Zosma34g01230.1 149 SS----PSSLSDYKSVHNHNQH---QlsqgaglasgpfilgKRMRSD 188
                      11....2222222222222222...1223444555566644222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.9E-3561197IPR005333Transcription factor, TCP
PROSITE profilePS5136928.20961115IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MATPIAGTNG AASPLVDSQS CQLQLLPHQV VISTDTTDTP TTITADSNSN AVLTTVKKPP  60
SKDRHSKVDG RGRRIRMPII CAARVFQLTR ELGHKSDGQT IEWLLRQAEP SIIAATGTGT  120
TPASFSTVSV SNRNGGSNSN SNSNGTTQSS PSSLSDYKSV HNHNQHQLSQ GAGLASGPFI  180
LGKRMRSDEE AEDREKEQGL GMSGGAGGGF GVGQFWALPA RTDMGQFWSF STPEFLQVPS  240
MNGRFAGVGL QPIGEASAAR VGNYLPVTQG QLNLLSSLSS APPATPSGRR DDDNPR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024994214.11e-89transcription factor TCP7-like
SwissprotQ9FMX28e-69TCP7_ARATH; Transcription factor TCP7
TrEMBLA0A0K9P7540.0A0A0K9P754_ZOSMR; TCP transcription factor 14
STRINGSolyc04g009180.1.11e-78(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.17e-46TCP family protein