PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma33g00800.1 | ||||||||
Common Name | ZOSMA_33G00800 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | FAR1 | ||||||||
Protein Properties | Length: 88aa MW: 9815.05 Da PI: 7.5059 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 27.4 | 1.1e-08 | 51 | 86 | 2 | 39 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 +Y +YA e GFsvrk ++++s ++ k+t+vC keg Zosma33g00800.1 51 MYYKYAGEKGFSVRKGSTRHS--KQGLRKKTYVCLKEG 86 79******************9..3447**********9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 4.0E-6 | 51 | 86 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence Send to blast |
MDSGVSEVKG ASPQDMTPEI EEQGQDFEQP SHTEKPKIGM MFNSIVEAEY MYYKYAGEKG 60 FSVRKGSTRH SKQGLRKKTY VCLKEGS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9P7S5 | 2e-57 | A0A0K9P7S5_ZOSMR; Uncharacterized protein |
Link Out ? help Back to Top | |
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Phytozome | Zosma33g00800.1 |