PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma31g00810.1 | ||||||||
Common Name | ZOSMA_31G00810 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | ZF-HD | ||||||||
Protein Properties | Length: 131aa MW: 14298.2 Da PI: 8.8639 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 96.2 | 2.5e-30 | 60 | 116 | 3 | 60 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 kv Y+eC+kNhAas+G havDGC+Efm+s geegta al+CaAC CHR+FH+reve + Zosma31g00810.1 60 KVWYRECRKNHAASVGRHAVDGCREFMAS-GEEGTAGALNCAACSCHRSFHKREVERQ 116 789*************************9.999*********************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 4.0E-21 | 56 | 123 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 1.7E-28 | 61 | 113 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 1.8E-25 | 63 | 113 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 24.624 | 63 | 112 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MPTSSSPSLH ISKSRAKVTP NHKTVELVVD QHHHLLMKIQ QDLSYKLIAG DINGSMLVNK 60 VWYRECRKNH AASVGRHAVD GCREFMASGE EGTAGALNCA ACSCHRSFHK REVERQVLGD 120 CSSNTASPRS * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Inhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. {ECO:0000269|PubMed:21455630}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010931461.2 | 4e-30 | mini zinc finger protein 2 | ||||
Refseq | XP_015069508.1 | 3e-30 | mini zinc finger protein 2-like | ||||
Swissprot | Q9LJW5 | 7e-27 | MIF2_ARATH; Mini zinc finger protein 2 | ||||
TrEMBL | A0A0K9P8V3 | 2e-92 | A0A0K9P8V3_ZOSMR; Uncharacterized protein | ||||
STRING | Gorai.006G017300.1 | 3e-29 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1431 | 34 | 120 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 3e-29 | mini zinc finger 2 |
Link Out ? help Back to Top | |
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Phytozome | Zosma31g00810.1 |
Publications ? help Back to Top | |||
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