PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma31g00450.1
Common NameZOSMA_31G00450
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family WRKY
Protein Properties Length: 522aa    MW: 56570.7 Da    PI: 7.66
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma31g00450.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.5e-29239296359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+++d +++++tYeg+Hnh+
  Zosma31g00450.1 239 DGCQWRKYGQKISKGNPCPRAYYRCTVApACPVRKQVQRCSDDMSILITTYEGTHNHP 296
                      9**************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-31222298IPR003657WRKY domain
SuperFamilySSF1182903.14E-26231298IPR003657WRKY domain
PROSITE profilePS5081128.047232298IPR003657WRKY domain
SMARTSM007741.1E-35237297IPR003657WRKY domain
PfamPF031063.3E-26239296IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
MPVAKSEGGK NAGHDHLDIN STPRSCLKYS SSKLLQVSET SSTSKASSSA TGCSNPTDLN  60
LNSREEEQLE STRAEMGEVR EENERLKTLL AAIMEDYKSL QSRIRNVTQQ QTDGLLSLGG  120
AGADTGTGAD VHVEEEQDHD HLVSLRLGTT STTKPQTKNS DDNIKEIDND EMNEGSLRLG  180
LQQTSAGSDP DTPSKRLFRR QNHTTPKRSD DEDEVSRQIH GKKARVSVRA RCDTPTMIDG  240
CQWRKYGQKI SKGNPCPRAY YRCTVAPACP VRKQVQRCSD DMSILITTYE GTHNHPLPMG  300
ATAMASTTAA AATMLMSGSS NPGHPSVEAP IATPNSALLN GLNFNSGLRQ YYQPPNPTIT  360
LDLTSPTTIL SQTAPRYTST NFNYSPMAMD HLHHPNTPWN GHLGLGTQIY SNMMSNVMIA  420
NQIQPPTAPA PTPASTFLQK SSDQKNSYKI AKEITTNPSF HSSIKDAITS FVSNGNSGSG  480
ANQQHANQML LRSSFGHSTT PKPSSSSSSP VDKDRDHIIK N*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-20224300176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PB890.0A0A0K9PB89_ZOSMR; Putative WRKY transcription factor
STRINGEOY020382e-90(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.16e-65WRKY DNA-binding protein 72