PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma303g00010.1 | ||||||||
Common Name | ZOSMA_303G00010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | FAR1 | ||||||||
Protein Properties | Length: 93aa MW: 10383.7 Da PI: 10.0657 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 22.6 | 3.4e-07 | 37 | 76 | 1 | 42 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkre 42 +fY +Y ++GFsvrks+++ + ++e t+rt+v sk+g+++ Zosma303g00010.1 37 NFYYRYVGRIGFSVRKSTTSFN--SEELTRRTLVYSKQGSSN 76 6***************998887..8899***********876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 1.1E-4 | 37 | 80 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence Send to blast |
MDSSILVNTD VELEPSITSN DHPSIDMSFK TLKDAQNFYY RYVGRIGFSV RKSTTSFNSE 60 ELTRRTLVYS KQGSSNAIIP SSTTSLKKPR KI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9PA47 | 9e-60 | A0A0K9PA47_ZOSMR; Uncharacterized protein |
Link Out ? help Back to Top | |
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Phytozome | Zosma303g00010.1 |