PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma29g01030.1
Common NameZOSMA_29G01030
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family HD-ZIP
Protein Properties Length: 690aa    MW: 77493.8 Da    PI: 7.0435
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma29g01030.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox43.17e-142782156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
         Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                     +rk  +++++ ++ L + F++ ++p++e++ ++ +k +++ ++Vk+WFqNrR+++k
  Zosma29g01030.1 27 KRKYCRHSPHTIQNLLAIFKEFPNPNEEQISDIGTKFNIEFQKVKFWFQNRRTQMK 82
                     789999***********************************************998 PP

2START123.13.5e-391874202206
                      HHHHHHHHHHHHHHHC-.TT-EEEE.....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....E CS
            START   2 laeeaaqelvkkalaee.pgWvkss.....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....k 78 
                      +a +a++elvk+a++++ + W+        e++n+++ l  f++  +       + +e  ras++  +++   ve+l+d+  +W  +++    k
  Zosma29g01030.1 187 IAVKAMDELVKLAKSSStDIWTANDtdfihEKLNYEKFLHAFPSCIGpkpqhigFVSEGTRASAIIMANSNVIVETLMDVD-RWVSMFPcsisK 279
                      78899********9765278*99989999*************9988899*999999999************9*********.************ PP

                      EEEEEEECTT.......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCE CS
            START  79 aetlevissg.......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksngh 161
                      a+t++v+s+        +alqlm+aelq+lsplvp R++ f+R+++   +g+w++vd+S+d+ ++ +     +s+  + ++pSg++ie+ sng 
  Zosma29g01030.1 280 ASTINVLSNIgvsgtkdNALQLMKAELQVLSPLVPiREVIFLRFCKMIAEGVWAVVDTSIDESTYGTIysiPKSSTGCWKFPSGCVIEDFSNGQ 373
                      ********988999999**************************************************99998999999**************** PP

                      ..EEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
            START 162 ..skvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                         kv+wveh+ ++++ +h++  sl++sg+  ga++w++tl+rqce+
  Zosma29g01030.1 374 skAKVIWVEHIMYNEYGIHEVHDSLMRSGAGLGANKWLSTLKRQCET 420
                      7779*****************************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.33E-111582IPR009057Homeodomain-like
PROSITE profilePS5007112.4222484IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.0E-112490IPR009057Homeodomain-like
SMARTSM003892.0E-92688IPR001356Homeobox domain
CDDcd000867.32E-102784No hitNo description
PfamPF000461.9E-112782IPR001356Homeobox domain
PROSITE profilePS5084832.812177423IPR002913START domain
SuperFamilySSF559613.48E-23182421No hitNo description
CDDcd088752.47E-77185419No hitNo description
SMARTSM002341.6E-25186420IPR002913START domain
PfamPF018522.6E-32187420IPR002913START domain
SuperFamilySSF559615.86E-8459617No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    Send to blast
MLNPRENVAD DESNRENPPS MISNYRKRKY CRHSPHTIQN LLAIFKEFPN PNEEQISDIG  60
TKFNIEFQKV KFWFQNRRTQ MKIQLEKQEN NAMIRENDKL LVDNNNLRMS IITRDPTFCR  120
FCGNQCMIEE FSLDEQHLRR ENAYLEEEID RAYSIAGRSL VDHQIFISSS VNGELKNERL  180
RTLYIQIAVK AMDELVKLAK SSSTDIWTAN DTDFIHEKLN YEKFLHAFPS CIGPKPQHIG  240
FVSEGTRASA IIMANSNVIV ETLMDVDRWV SMFPCSISKA STINVLSNIG VSGTKDNALQ  300
LMKAELQVLS PLVPIREVIF LRFCKMIAEG VWAVVDTSID ESTYGTIYSI PKSSTGCWKF  360
PSGCVIEDFS NGQSKAKVIW VEHIMYNEYG IHEVHDSLMR SGAGLGANKW LSTLKRQCET  420
LAFLMSTSSS PDIGIMGHRS LLKLVHRMTN SFYKGVCPSV NTWTMLSSSS SSSRDTSSNI  480
KLMMRKIFNS PGEPIGVVLN GATSLWLPVS HACLMKYLQD VSVRNEWDIL INGGPMHVTN  540
LVPKGWNSSN HISIIRPTVC VDDGRSNMVI VQETSTDESG SLMVYASMDN KVMDNVLNGG  600
DSSYIALLPS GFSIVPNTIS VDKRHKHGYN LVSELVESER EVVVGSIVTI SLQILADSKP  660
TSHVHVHSIE SMKSLIIYTL EKIKAAMNC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PDX30.0A0A0K9PDX3_ZOSMR; Homeobox-leucine zipper protein 3
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP120337116
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.11e-169HD-ZIP family protein