PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma29g00930.1
Common NameZOSMA_29G00930
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 334aa    MW: 37160.7 Da    PI: 8.6842
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma29g00930.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-104889546
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                     k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L+
  Zosma29g00930.1 48 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTNLEQELQ 89
                     788*************************98877777766554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-944107IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.374690IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.83E-74891No hitNo description
PfamPF001701.4E-74889IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.7E-84993No hitNo description
PROSITE patternPS0003605166IPR004827Basic-leucine zipper domain
PfamPF141441.1E-30130205IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MEVTSPRTDT STDADTDEKN QMFNDGQMVG LATSDCSDRS KEKTGDQKTL RRLAQNREAA  60
RKSRLRKKAY VQQLESSRLK LTNLEQELQR ARQQGIFISG SGDQSHAANG NGALAFDIEY  120
ARWLEEQNRH ISELRTAVNA HASDAELRIV VDGAMAQYDN IWKLKSNGAK SDVFHMLSGM  180
WKTPAERCFL WLGGFRSSEI LKLLANHLEP LTDQQLSSIR NLQQSSQQAE DALSQGMDAL  240
QQSLAETLAS ASPIGSGTSG NVANYMGQMA MAMGKLGTLE NFLHQADNLR QQTLQQLHRI  300
LTTRQSARAL LAIHDYLSRL RALSSLWLAR PRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020698027.20.0transcription factor TGA2.3
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0K9PBI40.0A0A0K9PBI4_ZOSMR; Transcription factor HBP-1b(C1)
STRINGAquca_009_00424.10.0(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-162TGACG motif-binding factor 6