PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma28g00770.1 | ||||||||
Common Name | ZOSMA_28G00770 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | G2-like | ||||||||
Protein Properties | Length: 148aa MW: 16622 Da PI: 6.3834 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 48.7 | 1.6e-15 | 41 | 70 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 A+Pk++lelm+v+gLt+e+v+SHLQkYR+ Zosma28g00770.1 41 DAVPKRVLELMNVPGLTRENVASHLQKYRI 70 69***************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 7.17E-9 | 38 | 75 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.2E-15 | 40 | 75 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.8E-13 | 41 | 70 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MKPALQTQFP PDGDGEELHL VVAVININFH AVYLFWACVA DAVPKRVLEL MNVPGLTREN 60 VASHLQKYRI SLKRMMIHDG DPIEATSTSI LQFTAPNLVP PEHPFFASVV SSSSRYLDCW 120 SPFDNTFGFG MIPHQSLASH QYQYQYQ* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9PEQ7 | 1e-107 | A0A0K9PEQ7_ZOSMR; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5796 | 37 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.1 | 5e-15 | response regulator 1 |
Link Out ? help Back to Top | |
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Phytozome | Zosma28g00770.1 |