PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma22g00910.1
Common NameZOSMA_22G00910
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family NAC
Protein Properties Length: 264aa    MW: 29502.9 Da    PI: 4.2341
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma22g00910.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.23.8e-11127102128
              NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                      +kktLvf++gr+p+ge+t+Wvmheyrl
  Zosma22g00910.1   1 MKKTLVFHHGRSPSGERTNWVMHEYRL 27 
                      8************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.325150IPR003441NAC domain
PfamPF023651.7E-4127IPR003441NAC domain
SuperFamilySSF1019413.92E-16150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MKKTLVFHHG RSPSGERTNW VMHEYRLTDK RLVNSGFSQD SYVLCRIFEK SGPGPKNGEQ  60
YGAPFMEDEW EDAMGNGLPS PKALGVQPLL ENDSMSTARI SVGDLVHELG EINHAEVPEN  120
PTEIFADLED LPLQDTKYQP GNVYSPSNSK DIDLELLKCL PLQDADYHVG DVYCPVYTPS  180
PPTNIEFELK CLPLQDANYH VGNIQCLKQT DIEFELQQCL LDFDTDSLLE MNDLQLPYSN  240
DDSKLPAISN VESPTTSVNS KHI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PKN10.0A0A0K9PKN1_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47313664
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.15e-34NAC domain containing protein 2