PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma1g02520.1
Common NameZOSMA_1G02520
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 631aa    MW: 69106 Da    PI: 6.967
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma1g02520.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.8e-11465523563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  ++ l+s++
  Zosma1g02520.1 465 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSSGLTSQN 523
                     9*************************************************999999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.0E-19461525IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.944463526IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.85E-11465515No hitNo description
PfamPF001706.9E-10465523IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-11465522No hitNo description
CDDcd147032.91E-25466515No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    Send to blast
MMGDAKESGN DLMQRMQSSM GTSPSAHLST QQQLQPHLFS NRFDPTNNPH APPPPFRNFS  60
LGFCSENNSS ISRDNIGNSI CNKKPTGIPP SHPNIPPTSQ YSQIPTSLSR SPTQHSPSQS  120
FGSVPSHSRS LSQPAGFTWL DSFPPLSPSP YKDTNTLQSS SPDPISNDAP MDEKDLVGSG  180
SSRKVASNIT LAGPFGMCSS GRTTDNLPPR KAHRKSHSEI PFGFTQNSSL PFMMAPPPPL  240
HLKQGGFFDR STSAKESFGF AKQQHPQLAK QELDWERGFD VSADGRVSEK KSEVENDDEL  300
MNAYMNLDVL NSSGTEEKHG DMDSRASGTK TTGPDSSENE AESSVNESGG TAPTLQQVTS  360
GKLTGRKEGT KRSASNDLCL NDVTSHHSRS ISMDSFIGKM NFGEDSPKLP PSPGIQPGQH  420
SRNNSLDGST NSFSLEFGNG EFSGAELKKI MANEKLAEIA MTDPKRAKRI LANRQSAARS  480
KERKMRYISE LEHKVQTLQT EATTLSAQLT LLQRDSSGLT SQNNELKFRL QAMEQQAQLR  540
DALNEALSAE VQRLKIATAE LGEANSSSNL NQQLTLKFQM FQLQQQQQQN QQQAQQSSQQ  600
SNFQTQQQQF QHQNQQQQQN DTAGKNESDK *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022747849.10.0transcription factor RF2a-like
TrEMBLA0A0K9PPW40.0A0A0K9PPW4_ZOSMR; BZIP family transcription factor, putative, expressed
STRINGcassava4.1_004047m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-107bZIP family protein