PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma1g01330.1 | ||||||||
Common Name | ZOSMA_1G01330 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | HB-other | ||||||||
Protein Properties | Length: 324aa MW: 36958.1 Da PI: 4.9744 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.3 | 1.3e-08 | 262 | 309 | 6 | 53 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +++k q+++Le+++++++ p+ ++ + ++L+ +++ WF +R Zosma1g01330.1 262 KLKKMQVQVLEKVYHRTKRPTDAMVSSIVYVTHLPRKRIIKWFEDKRV 309 67899***************************************9996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE pattern | PS00018 | 0 | 98 | 110 | IPR018247 | EF-Hand 1, calcium-binding site |
PROSITE profile | PS50071 | 9.07 | 254 | 314 | IPR001356 | Homeobox domain |
SMART | SM00389 | 2.1E-4 | 256 | 318 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 3.72E-9 | 257 | 311 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.9E-8 | 262 | 309 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 3.6E-6 | 262 | 309 | IPR001356 | Homeobox domain |
CDD | cd00086 | 6.31E-6 | 262 | 308 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002229 | Biological Process | defense response to oomycetes | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009682 | Biological Process | induced systemic resistance | ||||
GO:0009787 | Biological Process | regulation of abscisic acid-activated signaling pathway | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0098869 | Biological Process | cellular oxidant detoxification | ||||
GO:2000022 | Biological Process | regulation of jasmonic acid mediated signaling pathway | ||||
GO:2000071 | Biological Process | regulation of defense response by callose deposition | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004601 | Molecular Function | peroxidase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MACYSPSCCG LHRLGFHGLD GGGKRRAVTL PLPLQHLVVR QLQFQRSSSI FTAFARRKKL 60 VQEQRVEGKE EGGVDEDAFE ALFSQLEEDL KNDEISIDEN DDDEISEEDL ANLEKELEEA 120 FGDVDLDELS SSNIPSSENI DSDDEAEEIR PKLKNWQLRR LASAFKIGRR KTNIKSLSAE 180 LGLDRSFVLE MLRNPPSDLL LLSASLPDIV LKQPVQIENK FIEEEEDPSP IVEPLVEPIV 240 KPDSEAKTPI RLIQSRWSTE KKLKKMQVQV LEKVYHRTKR PTDAMVSSIV YVTHLPRKRI 300 IKWFEDKRVE DGIPVKLKAF QRM* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020251276.1 | 5e-84 | protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 | ||||
TrEMBL | A0A0K9PPL1 | 0.0 | A0A0K9PPL1_ZOSMR; Overexpressor of cationic peroxidase 3 | ||||
STRING | VIT_04s0008g05190.t01 | 7e-85 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP10700 | 35 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 3e-45 | overexpressor of cationic peroxidase 3 |
Link Out ? help Back to Top | |
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Phytozome | Zosma1g01330.1 |