PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma164g00410.1
Common NameZOSMA_164G00410
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family FAR1
Protein Properties Length: 146aa    MW: 16624.6 Da    PI: 10.4665
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma164g00410.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.69.4e-091155147
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                      +fY  Y  ++GF v+ks+++++   +  t+rt+vCskegk++    +
  Zosma164g00410.1 11 NFYYGYTGRIGFFVCKSTNSSN--AHGLTRRTLVCSKEGKSNAIIPS 55
                      6****************98887..4448************9875544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.6E-61157IPR004330FAR1 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MSFTTLEDAE NFYYGYTGRI GFFVCKSTNS SNAHGLTRRT LVCSKEGKSN AIIPSSNTSS  60
KKNEILEILE LGGRLKFHLL FKIIFGSFLY GSRHIITYWL HFRKGAFFPQ IRKLHLTLGT  120
LFMIWKLVIL LLANSTRMCQ CKMVV*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PW181e-102A0A0K9PW18_ZOSMR; Uncharacterized protein